Job Description P05194 Confidence 28.41% Date Thu Jan 5 10:58:42 GMT 2012 Rank 306 Aligned Residues 191 % Identity 10% Template c2fkpC_ PDB info PDB header:isomerase Chain: C: PDB Molecule:n-acylamino acid racemase; PDBTitle: the mutant g127c-t313c of deinococcus radiodurans n-2 acylamino acid racemase Resolution 2.00 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	K	I	I	V	S	L	M	A	K	D	I	A	S	V	K	S	E	A	L	A	Y	R	E	A	D	F	D	I	L	E	W	R	V	D	H	Y	A	D	L	S	N	V	E	S	V	M	A	A	A	K	I	L	R	E	T	M	P	E	K	P	L	L	F	T	F	R	S	A	K	E	G	G	E	Q	A	I	S	T	E
Query Conservation
Alig confidence																																									.	.	.	.	.	.	.																					.	.	.	.	.
Template Conservation																																									.	.	.	.	.	.	.																					.	.	.	.	.
Template Sequence		E	V	G	V	S	L	G	I	Q	A	D	E	Q	A	T	V	D	L	V	R	R	H	V	E	Q	G	Y	R	R	I	K	L	K	I	K	P	G	W	D	.	.	.	.	.	.	.	V	Q	P	V	R	A	T	R	E	A	F	P	D	I	R	L	T	V	D	A	.	.	.	.	.	N	S	A	Y	T	L	A	D	A
Template Known Secondary structure			B								S	S													T	T	T		S							B	T	T	B	S	.	.	.	.	.	.	.												S	S	S							.	.	.	.	.	T	T				G	G	G
Template Predicted Secondary structure																																									.	.	.	.	.	.	.																					.	.	.	.	.
Template SS confidence
		138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.								.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.						.	.	.	200	.	.	.	.	.
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	Y	I	A	L	N	R	A	A	I	D	S	G	L	V	D	M	I	D	L	E	L	F	T	G	D	D	Q	V	K	E	T	V	A	Y	A	H	A	H	D	V	K	V	V	M	S	N	H	D	F	H	K	T	P	E	A	E	E	I	I	A	R	L	R	K	M	Q	S	F	D	A	D	I	P	K	I	A	L	M	P
Query Conservation
Alig confidence				.	.	.									.				.	.																														.	.	.	.														.	.	.
Template Conservation				.	.	.									.				.	.																														.	.	.	.														.	.	.
Template Sequence		G	R	.	.	.	L	R	Q	L	D	E	Y	D	.	L	T	Y	.	.	I	E	Q	P	L	A	W	D	D	L	V	D	H	A	E	L	A	R	R	I	R	T	P	L	C	L	D	E	S	.	.	.	.	V	A	S	A	S	D	A	R	K	A	L	A	L	.	.	.	G	A	G	G	V	I	N	L	K	V	A	R
Template Known Secondary structure				.	.	.			G	G	G	G	G		.		S		.	.					S		T	T		S											S	S					S	T	T	.	.	.	.			S											.	.	.	T	S		S						T	T	T
Template Predicted Secondary structure				.	.	.									.				.	.																														.	.	.	.														.	.	.
Template SS confidence
		206	.				.	.	210	.	.	.	.	.		.	.	.			.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.					.	.	250	.	.	.	.	.	.	.	.	.	260				.	.	.	.	.	.	.	.	.	270	.	.
		176		.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
Predicted Secondary structure			.
Query SS confidence			.
Query Sequence		Q	.	S	T	S	D	V	L	T	L	L	A	A	T	L	E	M	Q	E	Q	Y	A	D	R	P	I	I	T	M	S	M	A	K	T	G	V	I	S	R	L	A	G	E	V	F	G	S	A	A	T	F	G	A	V	K	K	A	S	A	P	G	Q	I
Query Conservation			.
Alig confidence			.																.	.	.	.	.												.
Template Conservation																			.	.	.	.	.												.
Template Sequence		V	G	G	H	A	E	S	R	R	V	H	D	V	A	Q	S	F	.	.	.	.	.	G	A	P	V	W	C	G	G	M	L	E	.	S	G	I	G	R	A	H	N	I	H	L	S	C	L	S	N	F	R	L	P	G	D	T	S	S	A	S	R	Y
Template Known Secondary structure		T	T	S														T	.	.	.	.	.	T											.												T	T	S	T	T	B		S		B	S				G	G	G	T
Template Predicted Secondary structure																			.	.	.	.	.												.
Template SS confidence
		273	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.						290	.	.	.	.	.	.	.	.	.	300		.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions