Job Description P05194 Confidence 56.36% Date Thu Jan 5 10:58:42 GMT 2012 Rank 228 Aligned Residues 145 % Identity 10% Template c2dh3A_ PDB info PDB header:transport protein, signaling protein Chain: A: PDB Molecule:4f2 cell-surface antigen heavy chain; PDBTitle: crystal structure of human ed-4f2hc Resolution 2.80 Å

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		108	.	110	.	.	.	.	.	.	.	.	.		120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140								.	.	.				.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
Predicted Secondary structure														.																						.	.	.	.	.	.	.				.	.	.
Query SS confidence														.																						.	.	.	.	.	.	.				.	.	.
Query Sequence		G	L	V	D	M	I	D	L	E	L	F	T	.	G	D	D	Q	V	K	E	T	V	A	Y	A	H	A	H	D	V	K	V	V	M	.	.	.	.	.	.	.	S	N	H	.	.	.	D	F	H	K	T	P	E	A	E	E	I	I	A	R	L	R	K	M	Q	S	F	D	A	D	I	P	K	I	A	L	M	P	Q
Query Conservation														.																						.	.	.	.	.	.	.				.	.	.
Alig confidence														.																						.	.	.	.	.	.	.				.	.	.
Template Conservation
Template Sequence		A	Q	T	D	L	L	Q	I	D	P	N	F	G	S	K	E	D	F	D	S	L	L	Q	S	A	K	K	K	S	I	R	V	I	L	D	L	T	P	N	Y	R	G	E	N	S	W	F	S	T	Q	V	D	T	V	A	T	K	V	K	D	A	L	E	F	W	L	Q	A	G	V	D	G	F	Q	V	R	D	I	E	N
Template Known Secondary structure		T	T								T	T	T																T	T									T	T	T	T	S	S	S	T	T	S	S	S			T																T	T									G	G	G
Template Predicted Secondary structure
Template SS confidence
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
		177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.		.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.
Predicted Secondary structure																												.
Query SS confidence																												.
Query Sequence		S	T	S	D	V	L	T	L	L	A	A	T	L	E	M	Q	E	Q	Y	A	D	R	P	I	I	T	.	M	S	M	A	K	T	G	V	I	S	R	L	A	G	E	V	F	G	S	A	A	T	F	G	A	V	K	K	A	S	A	P	G	Q	I	S	V	N	D	L	R	T	V	L	T	I	L	H	Q	A
Query Conservation																												.
Alig confidence																												.
Template Conservation
Template Sequence		L	K	D	A	S	S	F	L	A	E	W	Q	N	I	T	K	G	F	S	E	D	R	L	L	I	A	G	T	N	S	S	D	L	Q	Q	I	L	S	L	L	E	S	N	K	D	L	L	L	T	S	S	Y	L	S	D	S	G	S	T	G	E	H	T	K	S	L	V	T	Q	Y	L	N	A	T	G	N	R
Template Known Secondary structure		S	T	T																	S	S								S												T	S		T	T						S	T	T				S	S		T	T													T	T	S
Template Predicted Secondary structure
Template SS confidence
		252	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions