Job Description P05194 Confidence 35.86% Date Thu Jan 5 10:58:42 GMT 2012 Rank 279 Aligned Residues 156 % Identity 12% Template c2cbjA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:hyaluronidase; PDBTitle: structure of the clostridium perfringens nagj family 842 glycoside hydrolase, a homologue of human o-glcnacase in3 complex with pugnac Resolution 2.35 Å

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		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.																			.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.
Query SS confidence																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.
Query Sequence		S	T	E	A	Y	I	A	L	N	R	A	A	I	D	S	G	L	V	D	M	I	D	L	E	L	F	T	G	D	D	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	K	E	T	V	A	Y	A	H	A	H	D	V	K	V	V	M	S	N	H	D	F	H	K	T	P	.	.	.	.	.
Query Conservation																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.
Alig confidence																							.	.	.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.
Template Conservation																							.	.	.	.
Template Sequence		T	H	Q	D	R	L	D	Q	I	K	F	Y	G	E	N	K	L	N	T	Y	I	.	.	.	.	Y	A	P	K	D	D	P	Y	H	R	E	K	W	R	E	P	Y	P	E	S	E	M	Q	R	M	Q	E	L	I	N	A	S	A	E	N	K	V	D	F	V	F	G	I	S	P	G	I	D	I	R	F	D	G	D	A
Template Known Secondary structure																T	T						.	.	.	.				T	T		T	T	T	T	T	T	T	T	S				T	T															T	T										T	T	T				S
Template Predicted Secondary structure																							.	.	.	.
Template SS confidence
		194	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.					.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.
					150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.				.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.												.	210	.
Predicted Secondary structure		.	.	.																								.	.	.																		.																				.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.																								.	.	.																		.																				.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	E	A	E	E	I	I	A	R	L	R	K	M	Q	S	F	D	A	D	I	P	K	I	A	.	.	.	L	M	P	Q	S	T	S	D	V	L	T	L	L	A	A	T	L	.	E	M	Q	E	Q	Y	A	D	R	P	I	I	T	M	S	M	A	K	T	.	.	.	.	.	.	.	.	.	.	.	G	V	I
Query Conservation		.	.	.																								.	.	.																		.																				.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.																								.	.	.																		.																				.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	E	E	D	F	N	H	L	I	T	K	A	E	S	L	Y	D	M	G	V	R	S	F	A	I	Y	W	D	D	I	Q	D	K	S	A	A	K	H	A	Q	V	L	N	R	F	N	E	E	F	V	K	A	K	G	D	V	K	P	L	I	T	V	P	T	E	Y	D	T	G	A	M	V	S	N	G	Q	P	R	A	Y
Template Known Secondary structure																		T	T	T									T	T		S																		T					S	S									S			S							T	T
Template Predicted Secondary structure
Template SS confidence
		270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.
		212	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	R	L	A	G	E	V	F	G	S	A	A	T	F	G	A	V	K	K	A	S	A	P	G	Q	I	S	V	N	D	L	R	T	V	L	T	I	L	H	Q	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	R	I	F	A	E	T	V	D	P	S	I	E	V	M	W	T	G	P	G	V	V	T	N	E	I	P	L	S	D	A	Q	L	I	S	G	I	Y	N	R	N
Template Known Secondary structure									S		T	T	S						S	S	S	S	S		S		B													T	S
Template Predicted Secondary structure
Template SS confidence
		350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions