Job Description P05194 Confidence 43.58% Date Thu Jan 5 10:58:42 GMT 2012 Rank 260 Aligned Residues 209 % Identity 13% Template c1ydoC_ PDB info PDB header:lyase Chain: C: PDB Molecule:hmg-coa lyase; PDBTitle: crystal structure of the bacillis subtilis hmg-coa lyase, northeast2 structural genomics target sr181. Resolution 2.71 Å

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		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	I	A	S	V	K	S	E	A	L	A	Y	R	E	A	D	F	D	I	L	E	W	R	V	D	H	Y	A	D	L	S	N	V	E	S	V	M	A	A	A	K	I	L	R	E	T	M	P	E	K	P	L	L	F	T	F	R	S	A	K	E	G	G	E	Q	A	I	S	T	E	A	Y	I	A	L	N	R	A	A	I
Query Conservation
Alig confidence																								.	.																																								.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																								.	.																																								.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	T	E	D	K	I	T	W	I	N	Q	L	S	R	T	G	L	S	Y	I	E	I	.	.	T	S	F	V	H	P	K	W	I	P	A	L	R	D	A	I	D	V	A	K	G	I	D	R	E	K	G	V	T	Y	A	A	L	V	P	N	Q	R	G	.	.	.	.	.	.	.	.	.	.	.	.	L	E	N	A	L
Template Known Secondary structure															T	T	T		S					.	.				S		T	T	T		G	G	G	T	T								S				T	T									S				.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																								.	.																																								.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.			.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.													.	.	.	90	.
		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.																.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150						.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.	.
Query SS confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.	.
Query Sequence		D	S	G	L	V	D	M	I	D	L	E	L	F	T	G	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	Q	V	K	E	T	V	A	Y	A	H	A	H	D	V	K	V	V	M	S	N	H	D	F	H	K	T	P	E	.	.	.	.	.	A	E	E	I	I	A	R	L	R	K	M	Q	S	F	D
Query Conservation																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.	.
Alig confidence					.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.	.
Template Conservation					.
Template Sequence		E	G	G	.	I	N	E	A	C	V	F	X	S	A	S	E	T	H	N	R	K	N	I	N	K	S	T	S	E	S	L	H	I	L	K	Q	V	N	N	D	A	Q	K	A	N	L	T	T	R	A	Y	L	S	T	V	F	G	C	P	Y	E	K	D	V	P	I	E	Q	V	I	R	L	S	E	A	L	F	E	F	G
Template Known Secondary structure				T	.		S								S	S						T	T	T		S																			T	T										T	T		B	T	T	T	B																		T
Template Predicted Secondary structure					.
Template SS confidence
		92	.	.		.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
		166	.	.	.	170	.	.	.	.	.	.			.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230					.	.	.	.				.	.
Predicted Secondary structure													.	.																																																							.	.	.	.					.	.	.
Query SS confidence													.	.																																																							.	.	.	.					.	.	.
Query Sequence		A	D	I	P	K	I	A	L	M	P	Q	.	.	S	T	S	D	V	L	T	L	L	A	A	T	L	E	M	Q	E	Q	Y	A	D	R	P	I	I	T	M	S	M	A	K	T	G	V	I	S	R	L	A	G	E	V	F	G	S	A	A	T	F	G	A	V	K	K	.	.	.	.	A	S	A	P	.	.	.	G	Q
Query Conservation													.	.																																																							.	.	.	.					.	.	.
Alig confidence													.	.																				.																																			.	.	.	.					.	.	.
Template Conservation																																		.
Template Sequence		I	S	E	L	S	L	G	D	T	I	G	A	A	N	P	A	Q	V	E	T	V	L	E	A	L	L	A	R	F	P	A	N	.	Q	I	A	L	H	F	H	D	T	R	G	T	A	L	A	N	X	V	T	A	L	Q	X	G	I	T	V	F	D	G	S	A	G	G	L	G	G	C	P	Y	A	P	G	S	S	G	N
Template Known Secondary structure			S							S	S																	T	T	S		G	G	.	G						B	G	G	G	S													T							B	G	G	G					T	T							B
Template Predicted Secondary structure																																		.
Template SS confidence
		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.		.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.
		237	.	.	240	.	.	.	.	.	.	.	.	.	250
Predicted Secondary structure
Query SS confidence
Query Sequence		I	S	V	N	D	L	R	T	V	L	T	I	L	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	A	T	E	D	I	V	Y	X	L	E	Q	X	D
Template Known Secondary structure			B											T	T
Template Predicted Secondary structure
Template SS confidence
		250	.	.	.	.	.	.	.	.	.	260	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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