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Job DescriptionP05194
Confidence76.95%DateThu Jan 5 10:58:42 GMT 2012
Rank179Aligned Residues205
% Identity12%Templatec1ydnA_
PDB info PDB header:lyaseChain: A: PDB Molecule:hydroxymethylglutaryl-coa lyase; PDBTitle: crystal structure of the hmg-coa lyase from brucella melitensis,2 northeast structural genomics target lr35.
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   26...30.........40....... ..50.........60.........70.........80.........90.........100.
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Query Sequence  DIASVKSEALAYREADFDILEW. . . . RVDHYADLSNVESVMAAAKILRETMPEKPLLFTFRSAKEGGEQAISTEAYIALN
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Template Sequence  PTADKIALINRLSDCGYARIEATSFVSPKWVPQLADSREVXAGIRRA. . . . . DGVRYSVLVPNXKG. . . . . . . . . . . . . Y
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TTTT
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   102.......110.........120... ......130.........140.........150. ........160.
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Query Sequence  RAAIDSGLVDMIDLELFTGDDQ. . . . . . . . . . . . . . . VKETVAYAHAHDVKVVMSNHDFHKTPEA. . . . . EEIIARLRKM
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Template Sequence  EAAAAAH. ADEIAVFISASEGFSKANINCTIAESIERLSPVIGAAINDGLAIRGYVSCVVECPYDGPVTPQAVASVTEQL
Template Known Secondary structure  TT.
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Query Sequence  QSFDADIPKIALMPQ. . STSDVLTLLAATLEMQEQYADRPIITMSMAKTGVISRLAGEVFGSAATFGAV. . . . KKASAP.
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Template Sequence  FSLGCHEVSLGDTIGRGTPDTVAAXLDAVLAIAPAH. SLAGHYHDTGGRALDNIRVSLEKGLRVFDASVGGLGGCPFAPG
Template Known Secondary structure  T
STTS


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   165....170.........180.........190.........200 .........210.........220.........230.........240...
 
   235....240.........250
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Query Sequence  . . GQISVNDLRTVLTILH
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Template Sequence  AKGNVDTVAVVEXLHEXG
Template Known Secondary structure  S

B
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   244.....250.........260.
 
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No model constructed - rank, confidence too low




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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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