Job Description P05194 Confidence 76.95% Date Thu Jan 5 10:58:42 GMT 2012 Rank 179 Aligned Residues 205 % Identity 12% Template c1ydnA_ PDB info PDB header:lyase Chain: A: PDB Molecule:hydroxymethylglutaryl-coa lyase; PDBTitle: crystal structure of the hmg-coa lyase from brucella melitensis,2 northeast structural genomics target lr35. Resolution 2.30 Å

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		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.					.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
Predicted Secondary structure																								.	.	.	.
Query SS confidence																								.	.	.	.
Query Sequence		D	I	A	S	V	K	S	E	A	L	A	Y	R	E	A	D	F	D	I	L	E	W	.	.	.	.	R	V	D	H	Y	A	D	L	S	N	V	E	S	V	M	A	A	A	K	I	L	R	E	T	M	P	E	K	P	L	L	F	T	F	R	S	A	K	E	G	G	E	Q	A	I	S	T	E	A	Y	I	A	L	N
Query Conservation																								.	.	.	.
Alig confidence																								.	.	.	.																						.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	T	A	D	K	I	A	L	I	N	R	L	S	D	C	G	Y	A	R	I	E	A	T	S	F	V	S	P	K	W	V	P	Q	L	A	D	S	R	E	V	X	A	G	I	R	R	A	.	.	.	.	.	D	G	V	R	Y	S	V	L	V	P	N	X	K	G	.	.	.	.	.	.	.	.	.	.	.	.	.	Y
Template Known Secondary structure														T	T	T	T		S								S		T	T	T		G	G	G	T	T								S				.	.	.	.	.	S	S	S							S	S				.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70						.	.	.	.	.	.	.	.	.	80	.	.	.	.														.
		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.																.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.						.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.	.
Query SS confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.	.
Query Sequence		R	A	A	I	D	S	G	L	V	D	M	I	D	L	E	L	F	T	G	D	D	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	K	E	T	V	A	Y	A	H	A	H	D	V	K	V	V	M	S	N	H	D	F	H	K	T	P	E	A	.	.	.	.	.	E	E	I	I	A	R	L	R	K	M
Query Conservation																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.	.
Alig confidence									.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.	.
Template Conservation									.
Template Sequence		E	A	A	A	A	A	H	.	A	D	E	I	A	V	F	I	S	A	S	E	G	F	S	K	A	N	I	N	C	T	I	A	E	S	I	E	R	L	S	P	V	I	G	A	A	I	N	D	G	L	A	I	R	G	Y	V	S	C	V	V	E	C	P	Y	D	G	P	V	T	P	Q	A	V	A	S	V	T	E	Q	L
Template Known Secondary structure							T	T	.		S								S									T	S	S																			T	T										S	S			T	T	T
Template Predicted Secondary structure									.
Template SS confidence
		86	.	.	.	90	.	.		.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.			.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.					.	230	.	.	.	.
Predicted Secondary structure																	.	.																																																					.	.	.	.							.
Query SS confidence																	.	.																																																					.	.	.	.							.
Query Sequence		Q	S	F	D	A	D	I	P	K	I	A	L	M	P	Q	.	.	S	T	S	D	V	L	T	L	L	A	A	T	L	E	M	Q	E	Q	Y	A	D	R	P	I	I	T	M	S	M	A	K	T	G	V	I	S	R	L	A	G	E	V	F	G	S	A	A	T	F	G	A	V	.	.	.	.	K	K	A	S	A	P	.
Query Conservation																	.	.																																																					.	.	.	.							.
Alig confidence																	.	.																				.																																	.	.	.	.							.
Template Conservation																																						.
Template Sequence		F	S	L	G	C	H	E	V	S	L	G	D	T	I	G	R	G	T	P	D	T	V	A	A	X	L	D	A	V	L	A	I	A	P	A	H	.	S	L	A	G	H	Y	H	D	T	G	G	R	A	L	D	N	I	R	V	S	L	E	K	G	L	R	V	F	D	A	S	V	G	G	L	G	G	C	P	F	A	P	G
Template Known Secondary structure					T		S							T	T	S																T	T	S		G	G	.	G						B		T	T	S													T							B	T	T			S		B	T	T	B	T	T
Template Predicted Secondary structure																																						.
Template SS confidence
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200		.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
				235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250
Predicted Secondary structure		.	.
Query SS confidence		.	.
Query Sequence		.	.	G	Q	I	S	V	N	D	L	R	T	V	L	T	I	L	H
Query Conservation		.	.
Alig confidence		.	.
Template Conservation
Template Sequence		A	K	G	N	V	D	T	V	A	V	V	E	X	L	H	E	X	G
Template Known Secondary structure		S			B		B											T	T
Template Predicted Secondary structure
Template SS confidence
		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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