Job Description P05194 Confidence 94.32% Date Thu Jan 5 10:58:42 GMT 2012 Rank 88 Aligned Residues 143 % Identity 14% Template c1yadD_ PDB info PDB header:transcription Chain: D: PDB Molecule:regulatory protein teni; PDBTitle: structure of teni from bacillus subtilis Resolution 2.10 Å

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		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.		.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
Predicted Secondary structure																																																										.
Query SS confidence																																																										.
Query Sequence		K	I	I	V	S	L	M	A	K	D	I	A	S	V	K	S	E	A	L	A	Y	R	E	A	D	F	D	I	L	E	W	R	V	D	H	Y	A	D	L	S	N	V	E	S	V	M	A	A	A	K	I	L	R	E	T	M	.	P	E	K	P	L	L	F	T	F	R	S	A	K	E	G	G	E	Q	A	I	S	T	E
Query Conservation																																																										.
Alig confidence																																						.	.	.	.																	.											.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																						.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	L	H	A	I	T	D	D	S	K	P	V	E	E	L	A	R	I	I	I	T	I	Q	N	E	V	D	F	I	H	I	R	E	R	S	K	.	.	.	.	S	A	A	D	I	L	K	L	L	D	L	I	F	E	G	G	I	D	K	R	K	L	V	M	N	G	R	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure									S		S													G	G	G		S							T	T	S	.	.	.	.															T	T			G	G	G					S		.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																						.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.					.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	Y	I	A	L	N	R	A	A	I	D	S	G	L	V	D	M	I	D	L	E	L	F	T	G	D	D	Q	V	K	E	T	V	A	Y	A	H	A	H	D	V	K	V	V	M	S	N	H	D	F	H	K	T	P	E	A	E	E	I	I	A	R	L	R	K	M	Q	S	F	D	A	D	I	P	K	I	A	L	M	P
Query Conservation
Alig confidence		.	.	.	.	.									.																	.	.	.	.																			.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.									.																	.	.	.	.																			.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	V	D	I	A	L	F	S	T	.	I	H	R	V	Q	L	P	S	G	S	F	S	P	K	Q	I	.	.	.	.	R	A	R	F	P	H	L	H	I	G	R	S	V	H	S	L	E	E	.	.	.	.	.	.	.	.	.	.	A	V	Q	A	E	K	E	D	A	D	Y	V	L	F	G	H	V	F
Template Known Secondary structure		.	.	.	.	.						T	T	T	.								T	T	S							.	.	.	.					T	T									S				.	.	.	.	.	.	.	.	.	.							T	T		S
Template Predicted Secondary structure		.	.	.	.	.									.																	.	.	.	.																			.	.	.	.	.	.	.	.	.	.
Template SS confidence
							65	.	.	.	.	70	.	.		.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.					.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.											.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	S	T	S	D	V	L	T	L	L	A	A	T	L	E	M	Q	E	Q	Y	A	D	R	P	I	I	T	M	S
Query Conservation
Alig confidence															.	.	.	.	.	.	.	.
Template Conservation															.	.	.	.	.	.	.	.
Template Sequence		R	G	V	S	L	L	S	D	I	K	Q	R	I	.	.	.	.	.	.	.	.	S	I	P	V	I	A	I	G
Template Known Secondary structure															.	.	.	.	.	.	.	.		S						S
Template Predicted Secondary structure															.	.	.	.	.	.	.	.
Template SS confidence
		135	.	.	.	.	140	.	.	.	.	.	.	.									.	.	150	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions