Job Description P05194 Confidence 33.25% Date Thu Jan 5 10:58:42 GMT 2012 Rank 286 Aligned Residues 141 % Identity 13% Template c1telA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:ribulose bisphosphate carboxylase, large subunit; PDBTitle: crystal structure of a rubisco-like protein from chlorobium2 tepidum Resolution 2.70 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		45	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.		.	.	.	.	.	.	120	.	.
Predicted Secondary structure																																																																							.										.
Query SS confidence																																																																							.										.
Query Sequence		L	E	W	R	V	D	H	Y	A	D	L	S	N	V	E	S	V	M	A	A	A	K	I	L	R	E	T	M	P	E	K	P	L	L	F	T	F	R	S	A	K	E	G	G	E	Q	A	I	S	T	E	A	Y	I	A	L	N	R	A	A	I	D	S	G	L	V	D	M	I	.	D	L	E	L	F	T	G	D	D	.
Query Conservation																																																																							.										.
Alig confidence																														.														.	.	.	.																			.					.										.
Template Conservation																														.														.	.	.	.																			.
Template Sequence		I	H	F	P	D	T	Y	L	A	D	F	E	G	P	K	F	G	I	E	G	L	R	D	I	L	N	A	H	.	G	R	P	I	F	F	G	V	V	K	P	N	I	.	.	.	.	G	L	S	P	G	E	F	A	E	I	A	Y	Q	S	W	L	G	G	.	L	D	I	A	K	D	D	E	M	L	A	D	V	T	W
Template Known Secondary structure										T	T					S	S										T			.	S	S								S	S		T	.	.	.	.	T																	T	.		S						T	T		S	S	B	T	T
Template Predicted Secondary structure																														.														.	.	.	.																			.
Template SS confidence
		1135	.	.	.	.	1140	.	.	.	.	.	.	.	.	.	1150	.	.	.	.	.	.	.	.	.	1160	.	.		.	.	.	.	.	.	.	1170	.	.	.	.	.					.	.	.	.	1180	.	.	.	.	.	.	.	.	.	1190	.	.	.		.	.	.	.	.	.	1200	.	.	.	.	.	.	.	.
											123	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	Q	V	K	E	T	V	A	Y	A	H	A	H	D	V	K	V	V	M	S	N	H	D	F	H	K	T	P	E	A	E	E	I	I	A	R	L	R	K	M	Q	S	F	D	A	D	I	P	K	I	A	L	M	P	Q	S	T	S	D	V	L	T	L	L	A	A	T	L	E	M	Q	E
Query Conservation		.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.																					.	.	.																													.	.	.	.	.	.	.
Template Conservation																															.	.	.																													.	.	.	.	.	.	.
Template Sequence		S	S	I	E	E	R	A	A	H	L	G	K	A	R	R	K	A	E	A	E	T	G	E	P	K	I	Y	L	A	.	.	.	N	I	T	D	E	V	D	S	L	M	E	K	H	D	V	A	V	R	N	G	A	N	A	L	L	I	N	A	.	.	.	.	.	.	.	L	P	V	G	L	S	A	V	R	M	L	S	N
Template Known Secondary structure		B																					S	S							.	.	.						G	G	G												T									.	.	.	.	.	.	.													T
Template Predicted Secondary structure																															.	.	.																													.	.	.	.	.	.	.
Template SS confidence
		1209	1210	.	.	.	.	.	.	.	.	.	1220	.	.	.	.	.	.	.	.	.	1230	.	.	.	.	.	.	.				.	.	1240	.	.	.	.	.	.	.	.	.	1250	.	.	.	.	.	.	.	.	.	1260	.	.	.	.	.								.	.	.	.	1270	.	.	.	.	.	.	.	.
		194	.	.	.	.	.	200	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	Y	A	D	R	P	I	I	T
Query Conservation
Alig confidence				.
Template Conservation				.
Template Sequence		Y	T	.	Q	V	P	L	I	G
Template Known Secondary structure		T		.	S	S
Template Predicted Secondary structure				.
Template SS confidence
		1279	1280		.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions