 |
Job Description | P05194 | Confidence | 26.65% | Date | Thu Jan 5 10:58:42 GMT 2012 |
Rank | 312 | Aligned Residues | 79 |
% Identity | 14% | Template | c1rd6A_ |
PDB info |
PDB header:hydrolase | Chain: A: PDB Molecule:chitinase a; |
PDBTitle: crystal structure of s. marcescens chitinase a mutant w167a
|
Resolution | 2.60 Å |
|
 |
  |   |
63 | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | |
|
. | . | . | . | . | . | . | 100 | . | . | . | . | . | . | |
|
|
|
. | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|  |  |  |
|
|
|
|
|
| . | . |
|  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . |
|
|
|
|
|  |  |  |  |  |
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
Query Sequence |   |
A | A | A | K | I | L | R | E | T | M | P | E | K | P | L | L | F | T | F | R | S | A | K | E | G | G | E | Q | A | I | . |
. |
S | T | E | A | Y | I | A | L | N | R | A | A | I | D | . |
. |
. |
. |
S | G | L | V | D | M | I | D | L | E | L | F | T | G | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
Query Conservation |   |
  |   |   |   |   |
|   |   |   |   |   |   |   |
|
|
|   |
|   |
|   |   |   |
|
|
|   |   |   |   | . | . |   |   |   |   |   |   |   |
|
|   |   |   |   |   | . | . | . | . |   |   |   |   |
|   |
|
|
|
|
|   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
Template Conservation |   |
  |   |
|   |   |
|
|   |   |   |
|   |
|
|
|
|
|
|
|
|
|
|   |   |
|   |   |
|   |   |   |
|   |   |   |   |
|   |   |
|
|   |
|
|
|   |
|
|   |   |
|   |
|   |
|
|
|
|
|
|
|
|
|
|   |   |   |
|   |   |   |   |   |
|   |   |   |
|   |   |
Template Sequence |   |
G | Q | L | M | A | L | K | Q | A | H | P | D | L | K | I | L | P | S | I | G | G | W | T | L | S | D | P | F | F | F | M | G | D | K | V | K | R | D | R | F | V | G | S | V | K | E | F | L | Q | T | W | K | F | F | D | G | V | D | I | D | W | E | F | P | G | G | K | G | A | N | P | N | L | G | S | P | Q | D | G | E |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |
| T | T |
|  |  |  |  |  |  |  |
| T | T | T |
| G | G | G | G | G | T | T | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| T | T |
|
|  |  |  |  |  |
| S |
| T | T | S |
| S | S |
| T | T |
|
|
| T | T |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
254 | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . |
  |
  |   |
|
|
|
|
|
|
121 | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . |
Predicted Secondary structure |   |
. | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
Query SS confidence |   |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
. |
. |
. |
. |
. |
. |
D | D | Q | V | K | E | T | V | A | Y | A | H | A | H | D | V | K | V | V | M | S |
Query Conservation |   |
. | . | . | . | . | . |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |
|
|   |
|
Alig confidence |   |
. | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |   |
|
|
|
|
|
|   |   |
|
|   |   |   |   |   |   |
|   |   |   |   |
|
|
Template Sequence |   |
T | Y | V | L | L | M | K | E | L | R | A | M | L | D | Q | L | S | A | E | T | G | R | K | Y | E | L | T |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
334 | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|