Job Description P05194 Confidence 86.65% Date Thu Jan 5 10:58:42 GMT 2012 Rank 134 Aligned Residues 201 % Identity 14% Template c1gehE_ PDB info PDB header:lyase Chain: E: PDB Molecule:ribulose-1,5-bisphosphate carboxylase/oxygenase; PDBTitle: crystal structure of archaeal rubisco (ribulose 1,5-bisphosphate2 carboxylase/oxygenase) Resolution 2.80 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.				.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.						40	.	.	.	.	.	.	.	.	.			50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.
Predicted Secondary structure																								.	.	.																	.	.	.	.	.											.	.
Query SS confidence																								.	.	.																	.	.	.	.	.											.	.
Query Sequence		K	T	V	T	V	K	D	L	V	I	G	T	G	A	P	K	I	I	V	S	L	M	.	.	.	A	K	D	I	A	S	V	K	S	E	A	L	A	Y	R	E	.	.	.	.	.	A	D	F	D	I	L	E	W	R	V	.	.	D	H	Y	A	D	L	S	N	V	E	S	V	M	A	A	A	K	I	L	R	E	T
Query Conservation																								.	.	.																	.	.	.	.	.											.	.
Alig confidence																								.	.	.																	.	.	.	.	.											.	.
Template Conservation
Template Sequence		K	A	Y	D	F	H	D	M	G	D	G	S	W	I	V	R	I	A	Y	P	F	H	A	F	E	E	A	N	L	P	G	L	L	A	S	I	A	G	N	I	F	G	M	K	R	V	K	G	L	R	L	E	D	L	Y	F	P	E	K	L	I	R	E	F	D	G	P	A	F	G	I	E	G	V	R	K	M	L	E	I
Template Known Secondary structure								B		S	S	S										G	G	G	S		T	T										T	S	G	G	G	G		T	T																	T	T					S	S										T
Template Predicted Secondary structure
Template SS confidence
		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
		72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.		.	.	.	.	.	.	120	.	.											.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Predicted Secondary structure																																												.										.	.	.	.	.	.	.	.	.	.
Query SS confidence																																												.										.	.	.	.	.	.	.	.	.	.
Query Sequence		M	P	E	K	P	L	L	F	T	F	R	S	A	K	E	G	G	E	Q	A	I	S	T	E	A	Y	I	A	L	N	R	A	A	I	D	S	G	L	V	D	M	I	.	D	L	E	L	F	T	G	D	D	.	.	.	.	.	.	.	.	.	.	Q	V	K	E	T	V	A	Y	A	H	A	H	D	V	K	V	V	M
Query Conservation																																												.										.	.	.	.	.	.	.	.	.	.
Alig confidence			.														.	.	.	.																			.					.										.	.	.	.	.	.	.	.	.	.
Template Conservation			.														.	.	.	.																			.
Template Sequence		K	.	D	R	P	I	Y	G	V	V	P	K	P	K	V	.	.	.	.	G	Y	S	P	E	E	F	E	K	L	A	Y	D	L	L	S	N	G	.	A	D	Y	M	K	D	D	E	N	L	T	S	P	W	Y	N	R	F	E	E	R	A	E	I	M	A	K	I	I	D	K	V	E	N	E	T	G	E	K	K	T	W
Template Known Secondary structure			.	S	S								S	S		S	.	.	.	.	S																T	T	.								T	T					T	T	S																				T		S
Template Predicted Secondary structure			.														.	.	.	.																			.
Template SS confidence
		153		.	.	.	.	.	.	160	.	.	.	.	.	.					.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.		.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
		141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.																.	.	.
Predicted Secondary structure																																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	N	H	D	F	H	K	T	P	E	A	E	E	I	I	A	R	L	R	K	M	Q	S	F	D	A	D	I	P	K	I	A	L	M	P	Q	S	T	S	D	V	L	T	L	L	A	A	T	L	E	M	Q	E	Q	Y	A	D	R	P	I	I	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	M	S	M
Query Conservation																																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence				.	.	.																																															.	.	.	.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation				.	.	.																																															.	.	.	.	.
Template Sequence		F	A	.	.	.	N	I	T	A	D	L	L	E	M	E	Q	R	L	E	V	L	A	D	L	G	L	K	H	A	M	V	D	V	V	I	T	G	W	G	A	L	R	Y	I	R	D	L	A	A	D	Y	.	.	.	.	.	G	L	A	I	H	G	H	R	A	M	H	A	A	F	T	R	N	P	Y	H	G	I	S	M
Template Known Secondary structure				.	.	.	B			S	S															T																										T	.	.	.	.	.	T								T	T	T					S		T	T	S
Template Predicted Secondary structure				.	.	.																																															.	.	.	.	.
Template SS confidence
		227	.				.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.						.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.
		206	.	.	.	210	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	K	T	G	V	I	S	R	L	A	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	V	L	A	K	L	Y	R	L	I	G
Template Known Secondary structure												T
Template Predicted Secondary structure
Template SS confidence
		299	300	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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