Job Description P37678 Confidence 97.95% Date Thu Jan 5 11:56:52 GMT 2012 Rank 166 Aligned Residues 201 % Identity 15% Template d8ruca1 SCOP info TIM beta/alpha-barrel RuBisCo, C-terminal domain RuBisCo, large subunit, C-terminal domain Resolution 1.60

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		13	.	.	.	.	.	.	20	.	.	.	.	.	.		.	.	.	30	.	.	.	.	.	.	.	.	.											40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.				.	.	.	.	.	.
Predicted Secondary structure																.														.	.	.	.	.	.	.	.	.	.																																		.	.	.
Query SS confidence																.														.	.	.	.	.	.	.	.	.	.																																		.	.	.
Query Sequence		S	S	L	E	A	A	Q	R	D	V	T	L	L	K	.	D	S	V	D	I	V	E	A	G	T	I	L	C	.	.	.	.	.	.	.	.	.	.	L	N	E	G	L	G	A	V	K	A	L	R	E	Q	C	P	D	K	I	I	V	A	D	W	K	V	A	D	A	G	E	T	L	.	.	.	A	Q	Q	A	F	G
Query Conservation																.														.	.	.	.	.	.	.	.	.	.																																		.	.	.
Alig confidence																.											.			.	.	.	.	.	.	.	.	.	.																																		.	.	.
Template Conservation																											.
Template Sequence		L	S	A	K	N	Y	G	R	A	V	Y	E	C	L	R	G	G	L	D	F	T	D	D	E	N	.	V	N	S	Q	P	F	M	R	W	R	D	R	F	L	F	C	A	E	A	L	Y	K	A	Q	A	E	T	G	E	I	K	G	H	Y	L	N	A	T	A	G	T	C	E	D	M	M	K	R	A	V	F	A	R	E
Template Known Secondary structure																	T	T		S	B				T	T	.		S	S	B	T	T	B																					S	S			B								S	S
Template Predicted Secondary structure																											.
Template SS confidence
		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.		.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.
		79	80	.	.	.	.	.	.	.		.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.											.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.		.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
Predicted Secondary structure											.																									.	.	.	.	.	.	.	.	.	.																		.
Query SS confidence											.																									.	.	.	.	.	.	.	.	.	.																		.
Query Sequence		A	G	A	N	W	M	T	I	I	.	C	A	A	P	L	A	T	V	E	K	G	H	A	M	A	Q	R	C	G	G	E	I	Q	I	.	.	.	.	.	.	.	.	.	.	E	L	F	G	N	W	T	L	D	D	A	R	D	W	H	R	I	.	G	V	R	Q	A	I	Y	H	R	G	R	D	A	Q	A	S	G	Q
Query Conservation											.																									.	.	.	.	.	.	.	.	.	.																		.
Alig confidence											.																									.	.	.	.	.	.	.	.	.	.																		.						.	.	.
Template Conservation																																																																					.	.	.
Template Sequence		L	G	V	P	I	V	M	H	D	Y	L	T	G	G	F	T	A	N	T	T	L	S	H	Y	C	R	D	N	G	L	L	L	H	I	H	R	A	M	H	A	V	I	D	R	Q	K	N	H	G	M	H	F	R	V	L	A	K	A	L	R	L	S	G	G	D	H	I	.	.	.	H	S	G	T	V	V	G	K	L	E
Template Known Secondary structure			T		S																									T								T	T						S		S	S	S	S																S			.	.	.					S	S	S	S	S
Template Predicted Secondary structure																																																																					.	.	.
Template SS confidence
		260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.				.	.	.	330	.	.	.	.	.	.
		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.																					.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.		.	.	.	.	.	.	.		190	.	.	.	.	.	.	.	.	.		200	.	.	.
Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.								.											.
Query SS confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.								.											.
Query Sequence		Q	W	G	E	A	D	L	A	R	M	K	A	L	S	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	G	L	E	L	S	I	T	G	G	I	T	P	A	D	L	P	L	F	K	D	.	I	R	V	K	A	F	I	.	A	G	R	A	L	A	G	A	A	N	.	P	A	Q	V
Query Conservation																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.								.											.
Alig confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.								.											.
Template Conservation
Template Sequence		G	E	R	D	I	T	L	G	F	V	D	L	L	R	D	D	Y	T	E	K	D	R	S	R	G	I	Y	F	T	Q	S	W	V	S	T	P	G	V	L	P	V	A	S	G	G	I	H	V	W	H	M	P	A	L	T	E	I	F	G	D	D	S	V	L	Q	F	G	G	G	T	L	G	H	P	W	G	N	A	P	G
Template Known Secondary structure																	S					B	G	G	G	T	B		S					T	T										S	S			G	G	G										S	S	S					S					T	S	T	T
Template Predicted Secondary structure
Template SS confidence
		337	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.
		204	.	.	.	.	.	210	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	G	D	F	H	A	Q	I	D	A	I	W	G	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	V	A	N	R	V	A	L	E	A	C	V	Q	A
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		417	.	.	420	.	.	.	.	.	.	.	.	.	430

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions