Job Description P37678 Confidence 96.77% Date Thu Jan 5 11:56:52 GMT 2012 Rank 236 Aligned Residues 140 % Identity 16% Template d2btma_ SCOP info TIM beta/alpha-barrel Triosephosphate isomerase (TIM) Triosephosphate isomerase (TIM) Resolution 2.40

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		66	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.		.	.	.							90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.								.	.	.	.	.	.	120	.	.	.	.
Predicted Secondary structure																							.				.	.	.	.	.	.																									.	.	.	.	.	.	.												.	.	.	.	.	.	.
Query SS confidence																							.				.	.	.	.	.	.																									.	.	.	.	.	.	.												.	.	.	.	.	.	.
Query Sequence		A	D	A	G	E	T	L	A	Q	Q	A	F	G	A	G	A	N	W	M	T	I	.	I	C	A	.	.	.	.	.	.	A	P	L	A	T	V	E	K	G	H	A	M	A	Q	R	C	G	G	E	I	Q	I	E	L	.	.	.	.	.	.	.	F	G	N	W	T	L	D	D	A	R	D	.	.	.	.	.	.	.
Query Conservation																							.				.	.	.	.	.	.																									.	.	.	.	.	.	.												.	.	.	.	.	.	.
Alig confidence																							.				.	.	.	.	.	.																									.	.	.	.	.	.	.												.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	Y	T	G	E	V	S	P	V	M	L	K	D	L	G	V	T	Y	V	I	L	G	H	S	E	R	R	Q	M	F	A	E	T	D	E	T	V	N	K	K	V	L	A	A	F	T	R	G	L	I	P	I	I	C	C	G	E	S	L	E	E	R	E	A	G	Q	T	N	A	V	V	A	S	Q	V	E	K	A	L	A
Template Known Secondary structure		S		T	T											T							S								S																		T																T	T															T
Template Predicted Secondary structure
Template SS confidence
		72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
					125	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.												.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.		.	.	.	.	.	.
Predicted Secondary structure		.	.	.																																							.	.	.	.	.	.	.	.	.	.	.																						.
Query SS confidence		.	.	.																																							.	.	.	.	.	.	.	.	.	.	.																						.
Query Sequence		.	.	.	W	H	R	I	G	V	R	Q	A	I	Y	H	R	G	R	D	A	Q	A	S	G	Q	Q	W	G	E	A	D	L	A	R	M	K	A	L	S	D	I	.	.	.	.	.	.	.	.	.	.	.	G	L	E	L	S	I	T	G	G	I	T	P	A	D	L	P	L	F	K	D	I	.	R	V	K	A	F	I
Query Conservation		.	.	.																																							.	.	.	.	.	.	.	.	.	.	.																						.
Alig confidence		.	.	.																																							.	.	.	.	.	.	.	.	.	.	.																						.
Template Conservation
Template Sequence		G	L	T	P	E	Q	V	K	Q	A	V	I	A	Y	E	P	I	W	A	I	G	T	G	K	S	S	T	P	E	D	A	N	S	V	C	G	H	I	R	S	V	V	S	R	L	F	G	P	E	A	A	E	A	I	R	I	Q	Y	G	G	S	V	K	P	D	N	I	R	D	F	L	A	Q	Q	Q	I	D	G	A	L
Template Known Secondary structure		T							T	T								G	G	G	T	T	T	S																													T	T	S						S	S			T	T	T						T	S	T	T
Template Predicted Secondary structure
Template SS confidence
		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	G	R	A	L	A	G	A	A	N	P	A	Q	V	A	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	G	G	A	S	L	E	P	A	S	F	L	Q	L	V	E
Template Known Secondary structure			S	G	G	G	S	S
Template Predicted Secondary structure
Template SS confidence
		232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions