Job Description P37678 Confidence 99.54% Date Thu Jan 5 11:56:52 GMT 2012 Rank 70 Aligned Residues 205 % Identity 12% Template d1w0ma_ SCOP info TIM beta/alpha-barrel Triosephosphate isomerase (TIM) Triosephosphate isomerase (TIM) Resolution 2.5

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.	.	.	10	.	.	.							.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.						.	.	.	.	.	.	.	.
Predicted Secondary structure															.	.	.	.	.	.																																																	.	.	.	.	.
Query SS confidence															.	.	.	.	.	.																																																	.	.	.	.	.
Query Sequence		M	S	R	P	L	L	Q	L	A	L	D	H	S	.	.	.	.	.	.	S	L	E	A	A	Q	R	D	V	T	L	L	K	D	S	V	D	I	V	E	A	G	T	I	L	C	L	N	E	G	L	G	A	V	K	A	L	R	E	Q	C	P	D	K	I	I	V	A	.	.	.	.	.	D	W	K	V	A	D	A	G
Query Conservation															.	.	.	.	.	.																																																	.	.	.	.	.
Alig confidence															.	.	.	.	.	.																													.	.	.	.	.									.							.	.	.	.	.
Template Conservation																																																	.	.	.	.	.									.
Template Sequence		M	R	L	P	I	L	I	I	N	F	K	A	Y	G	E	A	A	G	K	R	A	V	E	L	A	K	A	A	E	R	A	A	R	E	L	G	V	N	I	V	V	A	P	N	H	L	E	.	.	.	.	.	L	G	L	V	S	Q	S	V	.	D	I	P	V	Y	A	Q	G	A	D	V	E	A	G	G	A	H	T	A
Template Known Secondary structure				S	S							T	T		G	G	G	S	T																		T									G	G	G	.	.	.	.	.						T	T		.	S	S		B			S			S	B	S	S		S	S		T	T
Template Predicted Secondary structure																																																	.	.	.	.	.									.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.						.	.	50	.	.	.	.	.		.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.		.	.			.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
Predicted Secondary structure																			.			.	.
Query SS confidence																			.			.	.
Query Sequence		E	T	L	A	Q	Q	A	F	G	A	G	A	N	W	M	T	I	.	I	C	.	.	A	A	P	L	A	T	V	E	K	G	H	A	M	A	Q	R	C	G	G	E	I	Q	I	E	L	F	G	N	W	T	L	D	D	A	R	D	W	H	R	I	G	V	R	Q	A	I	Y	H	R	G	R	D	A	Q	A	S	G	Q
Query Conservation																			.			.	.
Alig confidence																			.			.	.																										.	.	.
Template Conservation																																																	.	.	.
Template Sequence		H	V	S	L	E	N	I	K	E	A	G	G	S	G	V	I	L	N	H	S	E	A	P	L	K	L	N	D	L	A	R	L	V	A	K	A	K	S	L	G	L	D	V	V	V	C	A	.	.	.	P	D	P	R	T	S	L	A	A	A	A	L	G	P	H	A	V	A	V	E	P	P	E	L	I	G	T	G	R	A
Template Known Secondary structure				B								T									T	T	S																	T	T								.	.	.	S	S										T			S							G	G	G	T	T	T	S
Template Predicted Secondary structure																																																	.	.	.
Template SS confidence
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.				.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
		147	.	.	150	.	.	.	.	.	.	.	.	.						160	.	.	.	.	.	.	.	.	.	170	.	.		.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.
Predicted Secondary structure															.	.	.	.	.														.
Query SS confidence															.	.	.	.	.														.
Query Sequence		Q	W	G	E	A	D	L	A	R	M	K	A	L	.	.	.	.	.	S	D	I	G	L	E	L	S	I	T	G	G	I	.	T	P	A	D	L	P	L	F	K	D	I	R	V	K	A	F	I	A	G	R	A	L	A	G	A	A	N	P	A	Q	V	A	G	D	F	H	A	Q	I	D	A	I
Query Conservation															.	.	.	.	.														.
Alig confidence															.	.	.	.	.														.
Template Conservation
Template Sequence		V	S	R	Y	K	P	E	A	I	V	E	T	V	G	L	V	S	R	H	F	P	E	V	S	V	I	T	G	A	G	I	E	S	G	D	D	V	A	A	A	L	R	L	G	T	R	G	V	L	L	A	S	A	A	V	K	A	K	D	P	Y	A	K	I	V	E	L	A	K	P	L	S	E	L
Template Known Secondary structure																						T	T	S						S	S			S										T	T		S										T		S	S
Template Predicted Secondary structure
Template SS confidence
		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions