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Job DescriptionP37678
Confidence99.92%DateThu Jan 5 11:56:52 GMT 2012
Rank44Aligned Residues206
% Identity13%Templated1tqja_
SCOP infoTIM beta/alpha-barrel Ribulose-phoshate binding barrel D-ribulose-5-phosphate 3-epimerase
Resolution1.60

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  SRPLLQLALDHSSLEAAQRDVTLLKD. SVDIVEAG. . . . . TILCLNEGLGAVKALREQCPDKIIVADWKVADAGETLAQQ
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Template Sequence  KNIVVAPSILSADFSRLGEEIKAVDEAGADWIHVDVMDGRFVPNITIGPLIVDAIRPLT. KKTLDVHLMIVEPEKY. VED
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BGGGS
GGGTT
SBSSSSS
B


GGG
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SSSSGGGT.
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   3......10.........20.........30.........40.........50.........60. ........70....... ..80
 
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Query Sequence  AFGAGANWMTIICAAPLA. TVEKGHAMAQRCGGEIQIELFGNWTLDDARDWHRIGVRQAIYHRGRDAQASGQQWGEADLA
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Template Sequence  FAKAGADIISVHVEHNASPHLHRTLCQIRELGKKAGAVLNPSTPLDFLEYVLPVCDLILIMSVNPQSFIPEVLPKIRALR
Template Known Secondary structure  T
S
STTT
TTTT

TT

GGGGTTTGGG
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GGG
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   81........90.........100.........110.........120.........130.........140.........150.........160
 
   155....160.........170.........180.........190.........200.........
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Query Sequence  RMKALSDIGLELSITGGITPADLPLFKDIRVKAFIAGRALAGAANPAQVAGDFHA
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Template Sequence  QMCDERGLDPWIEVDGGLKPNNTWQVLEAGANAIVAGSAVFNAPNYAEAIAGVRN
Template Known Secondary structure  T


SS

TTTTT

STSS
T
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   165....170.........180.........190.........200.........210.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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