Job Description P37678 Confidence 97.93% Date Thu Jan 5 11:56:52 GMT 2012 Rank 168 Aligned Residues 212 % Identity 18% Template d1svda1 SCOP info TIM beta/alpha-barrel RuBisCo, C-terminal domain RuBisCo, large subunit, C-terminal domain Resolution 1.80

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		3	.	.	.	.	.	.	10	.	.				.	.	.	.	.	.	.	20	.	.	.	.	.	.		.	.	.	30	.	.	.	.	.	.	.	.	.											40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.
Predicted Secondary structure												.	.	.															.														.	.	.	.	.	.	.	.	.	.
Query SS confidence												.	.	.															.														.	.	.	.	.	.	.	.	.	.
Query Sequence		R	P	L	L	Q	L	A	L	D	H	.	.	.	S	S	L	E	A	A	Q	R	D	V	T	L	L	K	.	D	S	V	D	I	V	E	A	G	T	I	L	C	.	.	.	.	.	.	.	.	.	.	L	N	E	G	L	G	A	V	K	A	L	R	E	Q	C	P	D	K	I	I	V	A	D	W	K	V	A	D	A
Query Conservation												.	.	.															.														.	.	.	.	.	.	.	.	.	.
Alig confidence												.	.	.															.														.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	P	L	L	G	C	T	I	K	P	K	L	G	L	S	A	K	N	Y	G	R	A	V	Y	E	C	L	R	G	G	L	D	F	T	K	D	D	E	N	I	N	S	Q	P	F	M	R	W	R	D	R	F	L	F	V	Q	D	A	T	E	T	A	E	A	Q	T	G	E	R	K	G	H	Y	L	N	V	T	A	P	T
Template Known Secondary structure		S								S		S	S	S																T	T		S						T	T		S	S	B	T	T	B																					S	S											S	S
Template Predicted Secondary structure
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
		69	70	.	.				.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90		.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.											.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.		.	130	.	.	.
Predicted Secondary structure						.	.	.																			.																						.	.	.	.	.	.	.	.	.	.																		.
Query SS confidence						.	.	.																			.																						.	.	.	.	.	.	.	.	.	.																		.
Query Sequence		G	E	T	L	.	.	.	A	Q	Q	A	F	G	A	G	A	N	W	M	T	I	I	C	A	A	.	P	L	A	T	V	E	K	G	H	A	M	A	Q	R	C	G	G	E	I	Q	I	.	.	.	.	.	.	.	.	.	.	E	L	F	G	N	W	T	L	D	D	A	R	D	W	H	R	I	.	G	V	R	Q	A
Query Conservation						.	.	.																			.																						.	.	.	.	.	.	.	.	.	.																		.
Alig confidence						.	.	.																			.																						.	.	.	.	.	.	.	.	.	.																		.
Template Conservation
Template Sequence		P	E	E	M	Y	K	R	A	E	F	A	K	E	I	G	A	P	I	I	M	H	D	Y	I	T	G	G	F	T	A	N	T	G	L	A	K	W	C	Q	D	N	G	V	L	L	H	I	H	R	A	M	H	A	V	I	D	R	N	P	N	H	G	I	H	F	R	V	L	T	K	I	L	R	L	S	G	G	D	H	L
Template Known Secondary structure																T								T	T	T	T																T								T	T						S		T	T	S	S																S
Template Predicted Secondary structure
Template SS confidence
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.
		134	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.																					.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.		.	.	.	.	.	.	.		190	.
Predicted Secondary structure																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.								.
Query SS confidence																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.								.
Query Sequence		I	Y	H	R	G	R	D	A	Q	A	S	G	Q	Q	W	G	E	A	D	L	A	R	M	K	A	L	S	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	G	L	E	L	S	I	T	G	G	I	T	P	A	D	L	P	L	F	K	D	.	I	R	V	K	A	F	I	.	A	G
Query Conservation																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.								.
Alig confidence			.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.								.
Template Conservation			.	.	.
Template Sequence		H	.	.	.	T	G	T	V	V	G	K	L	E	G	D	R	A	S	T	L	G	W	I	D	L	L	R	E	S	F	I	P	E	D	R	S	R	G	I	F	F	D	Q	D	W	G	S	M	P	G	V	F	A	V	A	S	G	G	I	H	V	W	H	M	P	A	L	V	N	I	F	G	D	D	S	V	L	Q	F	G
Template Known Secondary structure			.	.	.				S	T	T	S		G	G	G														S					B	G	G	G	T	B		S					T	T										S	S			G	G	G										S	S						S
Template Predicted Secondary structure			.	.	.
Template SS confidence
		320				.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.
		192	.	.	.	.	.	.	.		200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.
Predicted Secondary structure										.
Query SS confidence										.
Query Sequence		R	A	L	A	G	A	A	N	.	P	A	Q	V	A	G	D	F	H	A	Q	I	D	A	I	W	G	G
Query Conservation										.
Alig confidence										.
Template Conservation
Template Sequence		G	G	T	L	G	H	P	W	G	N	A	A	G	A	A	A	N	R	V	A	L	E	A	C	V	E	A
Template Known Secondary structure						T		T	T
Template Predicted Secondary structure
Template SS confidence
		397	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions