Job Description P37678 Confidence 99.94% Date Thu Jan 5 11:56:52 GMT 2012 Rank 35 Aligned Residues 214 % Identity 13% Template d1rd5a_ SCOP info TIM beta/alpha-barrel Ribulose-phoshate binding barrel Tryptophan biosynthesis enzymes Resolution 2.02

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		2	.	.	.	.			.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.		.	.	30	.	.	.	.	.	.	.	.	.			40	.	.	.	.																					.	.	.	.	.	50	.	.	.	.	.	.
Predicted Secondary structure							.	.																						.													.	.						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence							.	.																						.													.	.						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	R	P	L	L	.	.	Q	L	A	L	D	H	S	S	L	E	A	A	Q	R	D	V	T	L	L	K	D	.	S	V	D	I	V	E	A	G	T	I	L	C	.	.	L	N	E	G	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	A	V	K	A	L	R	E	Q	C	P	D
Query Conservation							.	.																						.													.	.						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence							.	.																						.													.	.						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.
Template Conservation																																																																																.
Template Sequence		G	K	T	A	F	I	P	Y	I	T	A	G	D	P	D	L	A	T	T	A	E	A	L	R	L	L	D	G	C	G	A	D	V	I	E	L	G	V	P	C	S	D	P	Y	I	D	G	P	I	I	Q	A	S	V	A	R	A	L	A	S	G	T	T	M	D	A	V	L	E	M	L	R	E	V	T	P	E	L	.	S
Template Known Secondary structure		T										T	T	S	S															T	T		S	S								S			T	T	S													T	T	T														G	G	G		.	S
Template Predicted Secondary structure																																																																																.
Template SS confidence
		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.		.
		57	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	I	I	V	A	D	W	K	V	A	D	A	G	E	T	L	A	Q	Q	A	F	G	A	G	A	N	W	M	T	I	I	C	A	A	P	L	A	T	V	E	K	G	H	A	M	A	Q	R	C	G	G	E	I	Q	I	E	L	F	G	N	W	T	L	D	D	A	R	D	W	H	R	I	G	V	R	Q	A	I	Y	H
Query Conservation
Alig confidence																																								.
Template Conservation																																								.
Template Sequence		C	P	V	V	L	L	S	Y	Y	K	P	I	M	F	R	S	L	A	K	M	K	E	A	G	V	H	G	L	I	V	P	D	L	P	Y	V	A	A	.	H	S	L	W	S	E	A	K	N	N	N	L	E	L	V	L	L	T	T	P	A	I	P	E	D	R	M	K	E	I	T	K	A	S	E	G	F	V	Y	L	V
Template Known Secondary structure		S								S					S			T						T	T							T	T			T	T	T		.										T	T									T	T	S														S
Template Predicted Secondary structure																																								.
Template SS confidence
		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.		.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
		137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.		.	.	.	.	.	.	.	.	170	.	.		.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.					.	.	.	200	.	.	.	.	.	.	.	.	.	210
Predicted Secondary structure																											.												.																									.	.	.	.
Query SS confidence																											.												.																									.	.	.	.
Query Sequence		R	G	R	D	A	Q	A	S	G	Q	Q	W	G	E	A	D	L	A	R	M	K	A	L	S	D	.	I	G	L	E	L	S	I	T	G	G	I	.	T	P	A	D	L	P	L	F	K	D	I	R	V	K	A	F	I	A	G	R	A	L	A	G	.	.	.	.	A	A	N	P	A	Q	V	A	G	D	F	H	A	Q
Query Conservation																											.												.																									.	.	.	.
Alig confidence																											.												.																									.	.	.	.
Template Conservation
Template Sequence		S	V	N	G	V	T	G	P	R	A	N	V	N	P	R	V	E	S	L	I	Q	E	V	K	K	V	T	N	K	P	V	A	V	G	F	G	I	S	K	P	E	H	V	K	Q	I	A	Q	W	G	A	D	G	V	I	I	G	S	A	M	V	R	Q	L	G	E	A	A	S	P	K	Q	G	L	R	R	L	E	E	Y
Template Known Secondary structure			S	S			B		T	T	S		B		T														S	S						S				S										T	T		S														S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.
		211	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	D	A	I	W	G	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	R	G	M	K	N	A
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		254	.	.	.	.	.	260

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions