Job Description P37678 Confidence 96.47% Date Thu Jan 5 11:56:52 GMT 2012 Rank 250 Aligned Residues 130 % Identity 17% Template d1kv5a_ SCOP info TIM beta/alpha-barrel Triosephosphate isomerase (TIM) Triosephosphate isomerase (TIM) Resolution 1.65

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		66	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.		.	.	.							90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.
Predicted Secondary structure																							.				.	.	.	.	.	.																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																							.				.	.	.	.	.	.																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	D	A	G	E	T	L	A	Q	Q	A	F	G	A	G	A	N	W	M	T	I	.	I	C	A	.	.	.	.	.	.	A	P	L	A	T	V	E	K	G	H	A	M	A	Q	R	C	G	G	E	I	Q	I	E	L	F	G	N	W	T	L	D	D	A	R	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																							.				.	.	.	.	.	.																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																							.				.	.	.	.	.	.																						.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																						.	.	.
Template Sequence		A	F	T	G	E	V	S	L	P	I	L	K	D	F	G	V	N	W	I	V	L	G	H	S	E	R	R	A	Y	Y	G	E	T	N	E	I	V	A	D	K	V	A	A	A	V	A	S	G	F	M	V	I	.	.	.	A	C	I	G	E	T	L	Q	E	R	E	S	G	R	T	A	V	V	V	L	T	Q	I	A	A
Template Known Secondary structure		S		T	T			B							T	T							S								S																		T					.	.	.												T	T
Template Predicted Secondary structure																																																						.	.	.
Template SS confidence
		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.				.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
								125	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.												.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.		.	.	.
Predicted Secondary structure		.	.	.	.	.	.																																							.	.	.	.	.	.	.	.	.	.	.																						.
Query SS confidence		.	.	.	.	.	.																																							.	.	.	.	.	.	.	.	.	.	.																						.
Query Sequence		.	.	.	.	.	.	W	H	R	I	G	V	R	Q	A	I	Y	H	R	G	R	D	A	Q	A	S	G	Q	Q	W	G	E	A	D	L	A	R	M	K	A	L	S	D	I	.	.	.	.	.	.	.	.	.	.	.	G	L	E	L	S	I	T	G	G	I	T	P	A	D	L	P	L	F	K	D	I	.	R	V	K
Query Conservation		.	.	.	.	.	.																																							.	.	.	.	.	.	.	.	.	.	.																						.
Alig confidence		.	.	.	.	.	.																																							.	.	.	.	.	.	.	.	.	.	.																						.
Template Conservation
Template Sequence		I	A	K	K	L	K	K	A	D	W	A	K	V	V	I	A	Y	E	P	V	W	A	I	G	T	G	K	V	A	T	P	Q	Q	A	Q	E	A	H	A	L	I	S	S	W	V	S	S	K	I	G	A	D	V	A	G	E	L	R	I	L	Y	G	G	S	V	N	G	K	N	A	R	T	L	Y	Q	Q	R	D	V	N
Template Known Secondary structure					T			G	G	G	G	G	G								G	G	G	S	S	S	S																							T														S	S			T	T	T						T	S	T	T
Template Predicted Secondary structure
Template SS confidence
		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
		187	.	.	190	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	F	I	A	G	R	A	L	A	G	A	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	F	L	V	G	G	A	S	L	K	P	E
Template Known Secondary structure						S	G	G	G	G	S	T	T
Template Predicted Secondary structure
Template SS confidence
		230	.	.	.	.	.	.	.	.	.	240	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions