Job Description P37678 Confidence 96.74% Date Thu Jan 5 11:56:52 GMT 2012 Rank 239 Aligned Residues 172 % Identity 16% Template d1gk8a1 SCOP info TIM beta/alpha-barrel RuBisCo, C-terminal domain RuBisCo, large subunit, C-terminal domain Resolution 1.4

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		44	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.			.	.	80	.	.	.	.	.	.	.		.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.
Predicted Secondary structure																																				.	.											.																									.	.	.	.	.	.	.	.	.
Query SS confidence																																				.	.											.																									.	.	.	.	.	.	.	.	.
Query Sequence		L	G	A	V	K	A	L	R	E	Q	C	P	D	K	I	I	V	A	D	W	K	V	A	D	A	G	E	T	L	A	Q	Q	A	F	.	.	G	A	G	A	N	W	M	T	I	I	.	C	A	A	P	L	A	T	V	E	K	G	H	A	M	A	Q	R	C	G	G	E	I	Q	I	.	.	.	.	.	.	.	.	.
Query Conservation																																				.	.											.																									.	.	.	.	.	.	.	.	.
Alig confidence																																				.	.											.																									.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	E	A	I	Y	K	A	Q	A	E	T	G	E	V	K	G	H	Y	L	N	A	T	A	G	T	C	E	E	M	M	K	R	A	V	A	K	E	L	G	V	P	I	I	M	H	D	Y	L	T	G	G	F	T	A	N	T	S	L	A	I	Y	C	R	D	N	G	L	L	L	H	I	H	R	A	M	H	A	V	I	D
Template Known Secondary structure													S	S			B								S	S											T	T	T	T		S																									T								T	T
Template Predicted Secondary structure
Template SS confidence
		222	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.
			112	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.		.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.																				.	.	.	.	.	.	.	.	170
Predicted Secondary structure		.																		.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.																		.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	E	L	F	G	N	W	T	L	D	D	A	R	D	W	H	R	I	.	G	V	R	Q	A	I	Y	H	R	G	R	D	A	Q	A	S	G	Q	Q	W	G	E	A	D	L	A	R	M	K	A	L	S	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	G	L	E	L	S	I	T	G
Query Conservation		.																		.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.																		.							.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																											.	.	.
Template Sequence		R	Q	R	N	H	G	I	H	F	R	V	L	A	K	A	L	R	M	S	G	G	D	H	L	H	.	.	.	S	G	T	V	V	G	K	L	E	G	E	R	E	V	T	L	G	F	V	D	L	M	R	D	D	Y	V	E	K	D	R	S	R	G	I	Y	F	T	Q	D	W	S	M	P	G	V	M	P	V	A	S	G
Template Known Secondary structure		S		S	S	S	S																S				.	.	.				S	S	S	S	S																	S					B	G	G	G	T	B		S															S
Template Predicted Secondary structure																											.	.	.
Template SS confidence
		303	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.				.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.
		171	.	.	.	.	.	.	.	.	180	.	.		.	.	.	.	.	.	.		190	.	.	.	.	.	.	.	.	.		200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
Predicted Secondary structure														.								.											.
Query SS confidence														.								.											.
Query Sequence		G	I	T	P	A	D	L	P	L	F	K	D	.	I	R	V	K	A	F	I	.	A	G	R	A	L	A	G	A	A	N	.	P	A	Q	V	A	G	D	F	H	A	Q	I	D	A	I	W	G	G	A
Query Conservation														.								.											.
Alig confidence														.								.											.
Template Conservation
Template Sequence		G	I	H	V	W	H	M	P	A	L	V	E	I	F	G	D	D	A	C	L	Q	F	G	G	G	T	L	G	H	P	W	G	N	A	P	G	A	A	A	N	R	V	A	L	E	A	C	T	Q	A	R
Template Known Secondary structure		S			G	G	G										S	S	S					S					T	S	T	T
Template Predicted Secondary structure
Template SS confidence
		381	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions