Job Description P37678 Confidence 98.21% Date Thu Jan 5 11:56:52 GMT 2012 Rank 134 Aligned Residues 213 % Identity 14% Template d1bxna1 SCOP info TIM beta/alpha-barrel RuBisCo, C-terminal domain RuBisCo, large subunit, C-terminal domain Resolution 2.70

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		3	.	.	.	.	.	.	10	.	.	.				.	.	.	.	.	.	20	.	.	.	.	.	.		.	.	.	30	.	.	.	.	.	.	.	.	.											40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.
Predicted Secondary structure													.	.	.														.														.	.	.	.	.	.	.	.	.	.
Query SS confidence													.	.	.														.														.	.	.	.	.	.	.	.	.	.
Query Sequence		R	P	L	L	Q	L	A	L	D	H	S	.	.	.	S	L	E	A	A	Q	R	D	V	T	L	L	K	.	D	S	V	D	I	V	E	A	G	T	I	L	C	.	.	.	.	.	.	.	.	.	.	L	N	E	G	L	G	A	V	K	A	L	R	E	Q	C	P	D	K	I	I	V	A	D	W	K	V	A	D	A
Query Conservation													.	.	.														.														.	.	.	.	.	.	.	.	.	.
Alig confidence													.	.	.														.														.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	P	L	L	G	A	T	T	K	P	K	L	G	L	S	G	R	N	Y	G	R	V	V	Y	E	G	L	K	G	G	L	D	F	M	K	D	D	E	N	I	N	S	Q	P	F	M	H	W	R	D	R	F	L	F	V	M	D	A	V	N	K	A	S	A	A	T	G	E	V	K	G	S	Y	L	N	V	T	A	G	T
Template Known Secondary structure		S								T	T		T	T																T	T		S						T	T		S	S		T	T	S																					T	S											S	S
Template Predicted Secondary structure
Template SS confidence
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.
		69	70	.	.				.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.											.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.
Predicted Secondary structure						.	.	.																																								.	.	.	.	.	.	.	.	.	.
Query SS confidence						.	.	.																																								.	.	.	.	.	.	.	.	.	.
Query Sequence		G	E	T	L	.	.	.	A	Q	Q	A	F	G	A	G	A	N	W	M	T	I	I	C	A	A	P	L	A	T	V	E	K	G	H	A	M	A	Q	R	C	G	G	E	I	Q	I	.	.	.	.	.	.	.	.	.	.	E	L	F	G	N	W	T	L	D	D	A	R	D	W	H	R	I	G	V	R	Q	A	I	Y
Query Conservation						.	.	.																																								.	.	.	.	.	.	.	.	.	.
Alig confidence						.	.	.																																								.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		M	E	E	M	Y	R	R	A	E	F	A	K	S	L	G	S	V	I	I	M	V	D	L	I	V	G	W	T	C	I	Q	S	M	S	N	W	C	R	Q	N	D	M	I	L	H	L	H	R	A	G	H	G	T	Y	T	R	Q	K	N	H	G	V	S	F	R	V	I	A	K	W	L	R	L	A	G	V	D	H	M	H
Template Known Secondary structure															T	T		S						G	G	G														T	T	T								T	T	T					S		T	T	S	S														T		S
Template Predicted Secondary structure
Template SS confidence
		250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.
		136	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.																					.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.		.	.	.	.	.	.	.		190	.	.	.
Predicted Secondary structure																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.								.
Query SS confidence																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.								.
Query Sequence		H	R	G	R	D	A	Q	A	S	G	Q	Q	W	G	E	A	D	L	A	R	M	K	A	L	S	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	G	L	E	L	S	I	T	G	G	I	T	P	A	D	L	P	L	F	K	D	.	I	R	V	K	A	F	I	.	A	G	R	A
Query Conservation																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.								.
Alig confidence													.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.								.
Template Conservation													.	.
Template Sequence		T	G	T	A	V	G	K	L	E	G	D	.	.	P	L	T	V	Q	G	Y	Y	N	V	C	R	D	A	Y	T	Q	T	D	L	T	R	G	L	F	F	D	Q	D	W	A	S	L	R	K	V	M	P	V	A	S	G	G	I	H	A	G	Q	M	H	Q	L	I	H	L	F	G	D	D	V	V	L	Q	F	G	G	G
Template Known Secondary structure					T	T	S	S	T	T			.	.														S					B	G	G	G	T	B		S					T	T											S			G	G	G										S	S
Template Predicted Secondary structure													.	.
Template SS confidence
		330	.	.	.	.	.	.	.	.	.	340			.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.
		194	.	.	.	.	.		200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.
Predicted Secondary structure								.
Query SS confidence								.
Query Sequence		L	A	G	A	A	N	.	P	A	Q	V	A	G	D	F	H	A	Q	I	D	A	I	W	G	G
Query Conservation								.
Alig confidence								.
Template Conservation
Template Sequence		T	I	G	H	P	Q	G	I	Q	A	G	A	T	A	N	R	V	A	L	E	A	M	V	L	A
Template Known Secondary structure				T		T	T
Template Predicted Secondary structure
Template SS confidence
		408	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions