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Job DescriptionP37678
Confidence100.00%DateThu Jan 5 11:56:52 GMT 2012
Rank19Aligned Residues214
% Identity19%Templatec3qw3B_
PDB info PDB header:transferase, lyaseChain: B: PDB Molecule:orotidine-5-phosphate decarboxylase/orotate PDBTitle: structure of leishmania donovani omp decarboxylase
Resolution1.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.... .....20.........30.........40.........50... ......60.........70
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Query Sequence  MSRPLLQLALDHSS. . . . . . LEAAQRDVTLLKDSVDIVEAGTILCLNEGLGAVKALREQ. . . . CPDKIIVADWKVADAGE
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Template Sequence  AKRSLLCVGLDPRAKTAAAAVEECKRLIEQTHEYAAAYKPNAAFFEFFGAEGWAALSEVIRAVPAGIPVVLDAKRGDIAD
Template Known Secondary structure  TT





SSGGG
SBTTTTS
TT

B


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   11........20.........30.........40.........50.........60.........70.........80.........90
 
   71..... ...80.........90.........100.........110.........120.........130..... ....140
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Query Sequence  TLAQQA. . . . FGAGANWMTIICAAPLATVEKGHAMAQRCGGEIQIELFGNWTLDDARDWHRIGVRQAIY. . . . . . HRGRD
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Template Sequence  TADAYATSAFKHLNAHAITASPYMGSDSLQPFMRYP. . . DKAVFVLCKTNKGSNDLQCLRVGDRYLYEAVAERAEGPWNV
Template Known Secondary structure  TTS

S

TT
T
T...TS

TTT
B
SSSBTTTT
T
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   91........100.........110.........120...... ...130.........140.........150.........160.......
 
   141........ 150.........160.........170.........180. ........ 190.........200.........210....
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Query Sequence  AQASGQQWG. . . EADLARMKALSDIGLELSITGGITPADLPLFK. . DIRVKAFI. AGRALAGAANPAQVAGDFHAQIDAI
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Template Sequence  NGNVGLVVGATDPVALARVRARAPTLWFLVPGIGASLKASLDAGLRADGSGMLINVSRGLARAADPRAAAKELCEEINAI
Template Known Secondary structure  TS

TT

SSS


TT



TTS

ST
SS
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   169170.........180.........190.........200.........210.........220.........230.........240........
 
   215..
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Query Sequence  WGG
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Template Sequence  RFA
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   252..
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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