Job Description P37678 Confidence 93.35% Date Thu Jan 5 11:56:52 GMT 2012 Rank 314 Aligned Residues 191 % Identity 14% Template c3noyA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; PDBTitle: crystal structure of ispg (gcpe) Resolution 2.70 Å

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		11	.	.	.	.	.	.	.	.	20		.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
Predicted Secondary structure												.																																																																					.
Query SS confidence												.																																																																					.
Query Sequence		D	H	S	S	L	E	A	A	Q	R	.	D	V	T	L	L	K	D	S	V	D	I	V	E	A	G	T	I	L	C	L	N	E	G	L	G	A	V	K	A	L	R	E	Q	C	P	D	K	I	I	V	A	D	W	K	V	A	D	A	G	E	T	L	A	Q	Q	A	F	G	A	G	A	N	W	M	T	I	I	C	.
Query Conservation												.																																																																					.
Alig confidence												.																						.	.												.															.	.	.																	.
Template Conservation																																		.	.												.															.	.	.
Template Sequence		K	T	H	D	V	E	A	T	L	N	Q	I	K	R	L	Y	E	A	G	C	E	I	V	R	V	A	V	P	H	K	E	D	.	.	V	E	A	L	E	E	I	V	K	K	S	.	P	M	P	V	I	A	D	I	H	F	A	P	S	Y	.	.	.	A	F	L	S	M	E	K	G	V	H	G	I	R	I	N	P	G
Template Known Secondary structure			T	T															T	T										S				.	.												.	S	S								S					.	.	.							T	T		S
Template Predicted Secondary structure																																		.	.												.															.	.	.
Template SS confidence
		32	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.			.	.	.	.	.	.	70	.	.	.	.		.	.	.	.	.	80	.	.	.	.	.	.	.	.				.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
			89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120																					.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
Predicted Secondary structure		.																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	A	A	P	L	A	T	V	E	K	G	H	A	M	A	Q	R	C	G	G	E	I	Q	I	E	L	F	G	N	W	T	L	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	A	R	D	W	H	R	I	G	V	R	Q	A	I	Y	H	R	G	R	D	A	Q	A	S	G	Q	Q
Query Conservation		.																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.
Template Conservation																																																																								.	.	.	.	.	.	.
Template Sequence		N	I	G	K	E	E	I	V	R	E	I	V	E	E	A	K	R	R	G	V	A	V	R	I	G	V	N	S	G	S	L	E	K	D	L	L	E	K	Y	G	Y	P	S	A	E	A	L	A	E	S	A	L	R	W	S	E	K	F	E	K	W	G	F	T	N	Y	K	V	S	I	.	.	.	.	.	.	.	K	G	S
Template Known Secondary structure				S																T									G	G	G										S	S																				T	T									.	.	.	.	.	.	.			S
Template Predicted Secondary structure																																																																								.	.	.	.	.	.	.
Template SS confidence
		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.								.	.	.
		148	.	150	.	.	.	.	.	.	.	.	.	160	.		.	.	.	.	.	.	.					.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.				.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.
Predicted Secondary structure																.								.	.	.	.																	.	.	.
Query SS confidence																.								.	.	.	.																	.	.	.
Query Sequence		W	G	E	A	D	L	A	R	M	K	A	L	S	D	.	I	G	L	E	L	S	I	.	.	.	.	T	G	G	I	T	P	A	D	L	P	L	F	K	D	I	R	.	.	.	V	K	A	F	I	A	G	R	A	L	A	G	A	A	N	P	A	Q	V	A	G	D	F	H	A	Q	I	D	A	I
Query Conservation																.								.	.	.	.																	.	.	.
Alig confidence																.								.	.	.	.																	.	.	.
Template Conservation
Template Sequence		D	V	L	Q	N	V	R	A	N	L	I	F	A	E	R	T	D	V	P	L	H	I	G	I	T	E	A	G	M	G	T	K	G	I	I	K	S	S	V	G	I	G	I	L	L	Y	M	G	I	G	D	T	V	R	V	S	L	T	D	D	P	V	V	E	V	E	T	A	Y	E	I	L	K	S	L
Template Known Secondary structure		S																								S	S			S																		T	T			S							S	S																T
Template Predicted Secondary structure
Template SS confidence
		179	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions