Job Description P37678 Confidence 97.32% Date Thu Jan 5 11:56:52 GMT 2012 Rank 213 Aligned Residues 198 % Identity 15% Template c3m9yB_ PDB info PDB header:isomerase Chain: B: PDB Molecule:triosephosphate isomerase; PDBTitle: crystal structure of triosephosphate isomerase from methicillin2 resistant staphylococcus aureus at 1.9 angstrom resolution Resolution 1.90 Å

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		1	.	.	.	.	.	.	.	.	10	.		.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.						.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.
Predicted Secondary structure													.																	.	.	.	.	.																																									.	.	.	.	.	.	.
Query SS confidence													.																	.	.	.	.	.																																									.	.	.	.	.	.	.
Query Sequence		M	S	R	P	L	L	Q	L	A	L	D	.	H	S	S	L	E	A	A	Q	R	D	V	T	L	L	K	D	.	.	.	.	.	S	V	D	I	V	E	A	G	T	I	L	C	L	N	E	G	L	G	A	V	K	A	L	R	E	Q	C	P	D	K	I	I	V	A	D	W	K	V	A	D	.	.	.	.	.	.	.
Query Conservation													.																	.	.	.	.	.																																									.	.	.	.	.	.	.
Alig confidence													.																	.	.	.	.	.															.	.	.	.																							.	.	.	.	.	.	.
Template Conservation																																																	.	.	.	.
Template Sequence		M	R	T	P	I	I	A	G	N	W	K	M	N	K	T	V	Q	E	A	K	D	F	V	N	A	L	P	T	L	P	D	S	K	E	V	E	S	V	I	C	A	P	A	I	Q	L	D	.	.	.	.	A	L	T	T	A	V	K	E	G	K	A	Q	G	L	E	I	G	A	Q	N	T	Y	F	E	D	N	G	A	F
Template Known Secondary structure			S										S																				T	T	T									G	G	G			.	.	.	.								T	T	S	S	T	T						S				S	S	S	S	S	S
Template Predicted Secondary structure																																																	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.					.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
		68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.		.	.	.							90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.
Predicted Secondary structure																					.				.	.	.	.	.	.																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																					.				.	.	.	.	.	.																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	G	E	T	L	A	Q	Q	A	F	G	A	G	A	N	W	M	T	I	.	I	C	A	.	.	.	.	.	.	A	P	L	A	T	V	E	K	G	H	A	M	A	Q	R	C	G	G	E	I	Q	I	E	L	F	G	N	W	T	L	D	D	A	R	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																					.				.	.	.	.	.	.																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																					.				.	.	.	.	.	.																						.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																				.	.	.
Template Sequence		T	G	E	T	S	P	V	A	L	A	D	L	G	V	K	Y	V	V	I	G	H	S	E	R	R	E	L	F	H	E	T	D	E	E	I	N	K	K	A	H	A	I	F	K	H	G	M	T	P	I	.	.	.	I	C	V	G	E	T	D	E	E	R	E	S	G	K	A	N	D	V	V	G	E	Q	V	K	K	A	V
Template Known Secondary structure		T	T											T															S																	T	T					.	.	.												T	T														T
Template Predicted Secondary structure																																																				.	.	.
Template SS confidence
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.				.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
						125	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.												.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.		.	.	.	.	.
Predicted Secondary structure		.	.	.	.																																							.	.	.	.	.	.	.	.	.	.	.																						.
Query SS confidence		.	.	.	.																																							.	.	.	.	.	.	.	.	.	.	.																						.
Query Sequence		.	.	.	.	W	H	R	I	G	V	R	Q	A	I	Y	H	R	G	R	D	A	Q	A	S	G	Q	Q	W	G	E	A	D	L	A	R	M	K	A	L	S	D	I	.	.	.	.	.	.	.	.	.	.	.	G	L	E	L	S	I	T	G	G	I	T	P	A	D	L	P	L	F	K	D	I	.	R	V	K	A	F
Query Conservation		.	.	.	.																																							.	.	.	.	.	.	.	.	.	.	.																						.
Alig confidence		.	.	.	.																																							.	.	.	.	.	.	.	.	.	.	.																						.
Template Conservation
Template Sequence		A	G	L	S	E	D	Q	L	K	S	V	V	I	A	Y	E	P	I	W	A	I	G	T	G	K	S	S	T	S	E	D	A	N	E	M	C	A	F	V	R	Q	T	I	A	D	L	S	S	K	E	V	S	E	A	T	R	I	Q	Y	G	G	S	V	K	P	N	N	I	K	E	Y	M	A	Q	T	D	I	D	G	A
Template Known Secondary structure		T	T																G	G	G	S	S	S	S																							S						T	T	S						S				T	T	T						T	S	T	T
Template Predicted Secondary structure
Template SS confidence
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
		189	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	A	G	R	A	L	A	G	A	A	N	P	A	Q	V	A	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	V	G	G	A	S	L	K	V	E	D	F	V	Q	L	L	E
Template Known Secondary structure				S	G	G	G	S	S
Template Predicted Secondary structure
Template SS confidence
		234	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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