 |
Job Description | P37678 | Confidence | 88.16% | Date | Thu Jan 5 11:56:52 GMT 2012 |
Rank | 360 | Aligned Residues | 126 |
% Identity | 13% | Template | c3l9cA_ |
PDB info |
PDB header:lyase | Chain: A: PDB Molecule:3-dehydroquinate dehydratase; |
PDBTitle: the crystal structure of smu.777 from streptococcus mutans ua159
|
Resolution | 1.60 Å |
|
 |
  |   |
2 | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | |
40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|  |  |  |  | . |  |  |
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  | . | . | . | . | . | . | . | . | . | . | . |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
Query Sequence |   |
S | R | P | L | L | Q | L | A | L | D | H | S | S | L | E | A | A | Q | R | D | V | T | L | L | K | D | S | V | D | I | V | E | A | G | T | I | L | C | . |
L | N | E | G | L | G | A | V | K | A | L | R | E | Q | C | P | D | K | I | I | V | A | D | W | K | V | A | D | A | G | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
Query Conservation |   |
  |
|   |   |
|   |
|
|
|
|   |   |   |   |
|   |   |   |   |
|   |   |   |   |   |   |   |
|
|   |
|
|
|
|   |   |
|   | . |   |   |   |
|   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |
|   |   |
|   |
|   |   |
|   |   | . | . | . | . | . | . | . | . | . | . | . |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . |
Template Conservation |   |
  |   |
|
|
|   |
|   |
|   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|
|
|
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |
|
|
|   |
|   |
|   |   |   |
|
|
|   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
R | S | M | K | I | V | V | P | V | M | P | Q | N | I | E | E | A | N | Q | L | D | L | T | R | I | D | S | T | D | I | I | E | W | R | A | D | Y | L | V | K | D | D | I | L | T | V | A | P | A | I | F | E | K | F | S | G | H | E | V | I | F | T | L | R | T | E | K | E | G | G | N | I | S | L | S | N | E | D | Y | L |
Template Known Secondary structure |   |
|
|
|  |  |  |  |  |  |
|
| S | S |  |  |  |  |  |  |
|
|
| T | T |
|
| T | T |
|  |  |  |  |  | G | G | G | S |
| G | G | G |  |  |  |  |  |  |  |  |  |  |  | T | T | T | S |  |  |  |  |  |
|
| B | G | G | G | T |
| S | B |
|
|
|  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|