Job Description P37678 Confidence 93.56% Date Thu Jan 5 11:56:52 GMT 2012 Rank 310 Aligned Residues 200 % Identity 14% Template c3kwsB_ PDB info PDB header:isomerase Chain: B: PDB Molecule:putative sugar isomerase; PDBTitle: crystal structure of putative sugar isomerase (yp_001305149.1) from2 parabacteroides distasonis atcc 8503 at 1.68 a resolution Resolution 1.68 Å

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		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.																	70	.	.	.	.	.	.	.
Predicted Secondary structure																																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	L	E	A	A	Q	R	D	V	T	L	L	K	D	S	V	D	I	V	E	A	G	T	I	L	C	L	N	E	G	L	G	A	V	K	A	L	R	E	Q	C	P	D	K	I	I	V	A	D	W	K	V	A	D	A	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	T	L	A	Q	Q	A	F
Query Conservation																																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence															.	.																										.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation															.	.																										.	.
Template Sequence		S	L	N	E	K	L	D	F	X	E	K	L	G	.	.	V	V	G	F	E	P	G	G	G	G	L	A	G	R	V	N	E	I	K	Q	A	L	N	G	R	.	.	N	I	K	V	S	A	I	C	A	G	F	K	G	F	I	L	S	T	D	P	A	I	R	K	E	C	X	D	T	X	K	E	I	I	A	A	A	G
Template Known Secondary structure		S											T	T	.	.							B	S	T	T													T	T	S	.	.	S												S		T	T	B	S	S
Template Predicted Secondary structure															.	.																										.	.
Template SS confidence
		64	.	.	.	.	.	70	.	.	.	.	.	.			.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.			.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.																	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.								.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.
Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.
Query SS confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.
Query Sequence		G	A	G	A	N	W	M	T	I	I	C	A	A	P	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	T	V	E	K	G	H	A	M	A	Q	R	C	G	G	E	I	Q	I	E	.	.	.	.	.	.	.	L	F	G	N	W	T	L	D	D	A	R	D	W	H	R	I	G	V	R	Q	A	I
Query Conservation																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.
Alig confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	L	G	S	T	G	V	I	I	V	P	A	F	N	G	Q	V	P	A	L	P	H	T	X	E	T	R	D	F	L	C	E	Q	F	N	E	X	G	T	F	A	A	Q	H	G	T	S	V	I	F	E	P	L	N	R	K	E	C	F	Y	L	R	Q	V	A	D	A	A	S	L	C	R	D	I	N	N	P	G	V	R
Template Known Secondary structure			T	T		S						S			T	T			S	B			S	S																					T	T										T	T	T		S	S																	T	T
Template Predicted Secondary structure
Template SS confidence
		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.
		135	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.										.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.		.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.
Predicted Secondary structure																								.	.	.	.	.	.	.	.	.																		.
Query SS confidence																								.	.	.	.	.	.	.	.	.																		.
Query Sequence		Y	H	R	G	R	D	A	Q	A	S	G	Q	Q	W	G	E	A	D	L	A	R	M	.	.	.	.	.	.	.	.	.	K	A	L	S	D	I	G	L	E	L	S	I	T	G	G	I	T	.	P	A	D	L	P	L	F	K	D	I	R	V	K	A	F	I	A	G	R	A	L	A	G	A	A	N	P	A	Q	V	A
Query Conservation																								.	.	.	.	.	.	.	.	.																		.
Alig confidence																								.	.	.	.	.	.	.	.	.																		.																				.
Template Conservation																																																																						.
Template Sequence		C	X	G	D	F	W	H	X	T	W	E	E	T	S	D	X	G	A	F	I	S	G	G	E	Y	L	Q	H	V	H	V	A	S	R	K	R	R	S	X	P	G	E	D	G	D	A	D	N	Y	I	N	G	F	K	G	L	K	X	I	G	Y	N	N	Y	V	S	F	E	.	C	G	C	Q	G	D	R	N	V	V	V
Template Known Secondary structure														S										G	G	G									T	T	T	S	S	S	T	T	T	T	G	G	G													T	T			S						.				S	S
Template Predicted Secondary structure																																																																						.
Template SS confidence
		220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.		.	.	290	.	.	.	.	.	.	.	.
		205	.	.	.	.	210	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	D	F	H	A	Q	I	D	A	I	W	G	G	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	A	A	V	K	L	L	R	E	Q	W	E	Q	A
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		299	300	.	.	.	.	.	.	.	.	.	310	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions