Job Description P37678 Confidence 93.99% Date Thu Jan 5 11:56:52 GMT 2012 Rank 303 Aligned Residues 125 % Identity 10% Template c3ktsA_ PDB info PDB header:transcriptional regulator Chain: A: PDB Molecule:glycerol uptake operon antiterminator regulatory protein; PDBTitle: crystal structure of glycerol uptake operon antiterminator regulatory2 protein from listeria monocytogenes str. 4b f2365 Resolution 2.75 Å

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		44	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.				.	70	.	.	.	.	.	.	.	.		.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110			.	.	.	.	.	.	.
Predicted Secondary structure																											.	.	.											.																																	.	.
Query SS confidence																											.	.	.											.																																	.	.
Query Sequence		L	G	A	V	K	A	L	R	E	Q	C	P	D	K	I	I	V	A	D	W	K	V	A	D	A	.	.	.	G	E	T	L	A	Q	Q	A	F	G	.	A	G	A	N	W	M	T	I	I	C	A	A	P	L	A	T	V	E	K	G	H	A	M	A	Q	R	C	G	G	E	I	Q	.	.	I	E	L	F	G	N	W
Query Conservation																											.	.	.											.																																	.	.
Alig confidence												.	.														.	.	.											.										.	.	.	.	.	.	.																	.	.
Template Conservation												.	.																																					.	.	.	.	.	.	.
Template Sequence		K	A	L	V	K	Y	A	Q	A	G	.	.	G	K	K	V	L	L	H	A	D	L	V	N	G	L	K	N	D	D	Y	A	I	D	F	L	C	T	E	I	C	P	D	G	I	I	S	T	.	.	.	.	.	.	.	R	G	N	A	I	M	K	A	K	Q	H	K	M	L	A	I	Q	R	L	F	M	I	D	S	S
Template Known Secondary structure											T	.	.	T							G	G	G			T				S										T	T			S					S	.	.	.	.	.	.	.											T	T											S
Template Predicted Secondary structure												.	.																																					.	.	.	.	.	.	.
Template SS confidence
		42	.	.	.	.	.	.	.	50	.			.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.								.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.
		118	.	120	.		.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.		.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.
Predicted Secondary structure						.																																																				.
Query SS confidence						.																																																				.
Query Sequence		T	L	D	D	.	A	R	D	W	H	R	I	G	V	R	Q	A	I	Y	H	R	G	R	D	A	Q	A	S	G	Q	Q	W	G	E	A	D	L	A	R	M	K	A	L	S	D	I	G	L	E	L	S	I	T	G	G	I	.	T	P	A	D	L	P	L	F	K	D	I	R	V	K	A	F
Query Conservation						.																																																				.
Alig confidence						.																			.	.	.	.	.	.	.	.	.													.	.											.
Template Conservation																									.	.	.	.	.	.	.	.	.													.	.
Template Sequence		A	Y	N	K	G	V	A	L	I	Q	K	V	Q	P	D	C	I	E	L	L	P	G	I	.	.	.	.	.	.	.	.	.	I	P	E	Q	V	Q	K	M	T	Q	K	L	.	.	H	I	P	V	I	A	G	G	L	I	E	T	S	E	Q	V	N	Q	V	I	A	S	G	A	I	A	V
Template Known Secondary structure																S							T	T	.	.	.	.	.	.	.	.	.													.	.								S	S			S									T	T	T
Template Predicted Secondary structure																									.	.	.	.	.	.	.	.	.													.	.
Template SS confidence
		113	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.										.	.	.	.	140	.	.	.	.	.	.	.			.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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