Job Description P37678 Confidence 94.36% Date Thu Jan 5 11:56:52 GMT 2012 Rank 296 Aligned Residues 199 % Identity 11% Template c3k13A_ PDB info PDB header:transferase Chain: A: PDB Molecule:5-methyltetrahydrofolate-homocysteine methyltransferase; PDBTitle: structure of the pterin-binding domain metr of 5-2 methyltetrahydrofolate-homocysteine methyltransferase from3 bacteroides thetaiotaomicron Resolution 2.00 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.		.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.							.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.			.
Predicted Secondary structure																		.																																.	.	.	.	.	.																								.	.
Query SS confidence																		.																																.	.	.	.	.	.																								.	.
Query Sequence		A	L	D	H	S	S	L	E	A	A	Q	R	D	V	T	L	.	L	K	D	S	V	D	I	V	E	A	G	T	I	L	C	L	N	E	G	L	G	A	V	K	A	L	R	E	Q	C	P	.	.	.	.	.	.	D	K	I	I	V	A	D	W	K	V	A	D	A	G	E	T	L	A	Q	Q	A	F	G	.	.	A
Query Conservation																		.																																.	.	.	.	.	.																								.	.
Alig confidence																		.																																.	.	.	.	.	.								.	.	.	.													.	.
Template Conservation																																																															.	.	.	.
Template Sequence		L	V	N	E	K	K	Y	D	E	A	L	S	I	A	R	Q	Q	V	E	D	G	A	L	V	I	D	V	N	X	D	D	G	L	L	D	A	R	T	E	X	T	T	F	L	N	L	I	X	S	E	P	E	I	A	R	V	P	V	X	I	D	.	.	.	.	S	S	K	W	E	V	I	E	A	G	L	K	C	L	Q
Template Known Secondary structure					T	T															T	T		S									T	T	S															T						T	S						.	.	.	.		S													S
Template Predicted Secondary structure																																																															.	.	.	.
Template SS confidence
		371	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.					.	.	.	.	.	.	.	.	440	.	.	.	.	.	.
		80	.	.	.	.	.		.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.						.	.	.	.	.	120	.	.	.	.	.	.	.											.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.
Predicted Secondary structure								.																														.	.	.	.	.														.	.	.	.	.	.	.	.	.	.
Query SS confidence								.																														.	.	.	.	.														.	.	.	.	.	.	.	.	.	.
Query Sequence		G	A	N	W	M	T	.	I	I	C	A	A	P	L	A	T	V	E	K	G	H	A	M	A	Q	R	C	G	G	E	I	Q	I	E	L	F	.	.	.	.	.	G	N	W	T	L	D	D	A	R	D	W	H	R	.	.	.	.	.	.	.	.	.	.	I	G	V	R	Q	A	I	Y	H	R	G	R	D	A	Q	A
Query Conservation								.																														.	.	.	.	.														.	.	.	.	.	.	.	.	.	.
Alig confidence								.																														.	.	.	.	.														.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	K	S	I	V	N	S	I	S	L	K	E	G	E	E	V	F	L	E	H	A	R	I	I	K	Q	Y	G	A	A	T	V	V	X	A	F	D	E	K	G	Q	A	D	T	A	A	R	K	I	E	V	C	E	R	A	Y	R	L	L	V	D	K	V	G	F	N	P	H	D	I	I	F	D	P	N	V	L	A	V	A
Template Known Secondary structure		S									S	T	T																T							S			T	T					S																			T				G	G	G											S
Template Predicted Secondary structure
Template SS confidence
		447	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.
		144	.	.	.	.					.	150	.	.	.	.	.	.	.	.	.	160	.	.			.	.	.	.	.	.	.						170	.	.											.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190		.	.	.	.	.	.	.	.	.	200	.
Predicted Secondary structure							.	.	.	.															.	.								.	.	.	.	.				.	.	.	.	.	.	.	.	.	.																			.
Query SS confidence							.	.	.	.															.	.								.	.	.	.	.				.	.	.	.	.	.	.	.	.	.																			.
Query Sequence		S	G	Q	Q	W	.	.	.	.	G	E	A	D	L	A	R	M	K	A	L	S	D	I	.	.	G	L	E	L	S	I	T	.	.	.	.	.	G	G	I	.	.	.	.	.	.	.	.	.	.	T	P	A	D	L	P	L	F	K	D	I	R	V	K	A	F	I	A	.	G	R	A	L	A	G	A	A	N	P	A
Query Conservation							.	.	.	.															.	.								.	.	.	.	.				.	.	.	.	.	.	.	.	.	.																			.
Alig confidence							.	.	.	.															.	.								.	.	.	.	.				.	.	.	.	.	.	.	.	.	.																			.
Template Conservation
Template Sequence		T	G	I	E	E	H	N	N	Y	A	V	D	F	I	E	A	T	G	W	I	R	K	N	L	P	G	A	H	V	S	G	G	V	S	N	L	S	F	S	F	R	G	N	N	Y	I	R	E	A	X	H	A	V	F	L	Y	H	A	I	Q	Q	G	X	D	X	G	I	V	N	P	G	S	V	L	Y	S	D	I	P	A
Template Known Secondary structure		S	S		G	G	G	T	T																S	T	T						B	G	G	G	G	G	G	G	G	T	T																			T	T													G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		527	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.
		202	.	.	.	.	.	.	.	210	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	V	A	G	D	F	H	A	Q	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	T	L	E	K	I	E	D	V	V
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		608	.	610	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions