Job Description P37678 Confidence 99.96% Date Thu Jan 5 11:56:52 GMT 2012 Rank 26 Aligned Residues 202 % Identity 14% Template c3cu2A_ PDB info PDB header:isomerase Chain: A: PDB Molecule:ribulose-5-phosphate 3-epimerase; PDBTitle: crystal structure of ribulose-5-phosphate 3-epimerase (yp_718263.1)2 from haemophilus somnus 129pt at 1.91 a resolution Resolution 1.91 Å

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		1	.	.	.	.	.	.				.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.				.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.		.	.	.	70	.	.	.
Predicted Secondary structure									.	.	.																					.	.	.																																								.
Query SS confidence									.	.	.																					.	.	.																																								.
Query Sequence		M	S	R	P	L	L	Q	.	.	.	L	A	L	D	H	S	S	L	E	A	A	Q	R	D	V	T	L	L	K	D	.	.	.	S	V	D	I	V	E	A	G	T	I	L	C	L	N	E	G	L	G	A	V	K	A	L	R	E	Q	C	P	D	K	I	I	V	A	D	W	K	V	A	.	D	A	G	E	T	L	A
Query Conservation									.	.	.																					.	.	.																																								.
Alig confidence									.	.	.																					.	.	.																									.	.	.	.	.											.
Template Conservation																																																											.	.	.	.	.
Template Sequence		L	K	Q	Q	K	L	S	V	G	I	L	S	A	N	W	L	Q	L	N	E	E	V	T	T	L	L	E	N	Q	I	N	V	L	H	F	D	I	A	D	G	Q	F	S	S	L	F	T	V	G	A	I	G	I	K	Y	F	P	.	.	.	.	.	T	H	C	F	K	D	V	H	L	X	V	R	N	Q	L	E	V	A
Template Known Secondary structure			T	T							G	G	G	S		G	G	G											T	T										B	S	S	S	S	S		B		B		T					T	S		.	.	.	.	.	T	T	S									S
Template Predicted Secondary structure																																																											.	.	.	.	.
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.						.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.										.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
Predicted Secondary structure																																	.	.	.	.	.	.	.	.	.
Query SS confidence																																	.	.	.	.	.	.	.	.	.
Query Sequence		Q	Q	A	F	G	A	G	A	N	W	M	T	I	I	C	A	A	P	L	A	T	V	E	K	G	H	A	M	A	Q	R	.	.	.	.	.	.	.	.	.	C	G	G	E	I	Q	I	E	L	F	G	N	W	T	L	D	D	A	R	D	W	H	R	I	G	V	R	Q	A	I	Y	H	R	G	R	D	A	Q	A	S
Query Conservation																																	.	.	.	.	.	.	.	.	.
Alig confidence																						.											.	.	.	.	.	.	.	.	.																									.							.
Template Conservation																						.																																												.							.
Template Sequence		K	A	V	V	A	N	G	A	N	L	V	T	L	Q	L	E	Q	Y	H	D	.	F	A	L	T	I	E	W	L	A	K	Q	K	T	T	Y	A	N	Q	V	Y	P	V	L	I	G	A	C	L	C	P	E	T	P	I	S	E	L	E	P	Y	L	D	Q	.	I	D	V	I	Q	L	.	L	T	L	D	P	R	N	G
Template Known Secondary structure							T	T		S						T	T		T	T	S	.									T	T						T	T													T	T	S		G	G	G	G	T	T	T	T	T	T	.		S					.		S			T	T	T	T
Template Predicted Secondary structure																						.																																												.							.
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.		.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.		.	.	150	.	.	.		.	.	.	.	.	.	160	.
		145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.							.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.			.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.
Predicted Secondary structure																				.	.	.	.	.	.																								.	.
Query SS confidence																				.	.	.	.	.	.																								.	.
Query Sequence		G	Q	Q	W	G	E	A	D	L	A	R	M	K	A	L	S	D	I	.	.	.	.	.	.	G	L	E	L	S	I	T	G	G	I	T	P	A	D	L	P	L	F	K	D	I	R	V	.	.	K	A	F	I	A	G	R	A	L	A	G	A	A	N	P	A	Q	V	A	G	D	F	H	A	Q	I
Query Conservation																				.	.	.	.	.	.																								.	.
Alig confidence																				.	.	.	.	.	.																								.	.												.
Template Conservation																																																														.
Template Sequence		T	K	Y	P	S	E	L	I	L	D	R	V	I	Q	V	E	K	R	L	G	N	R	R	V	E	K	L	I	N	I	D	G	S	X	T	L	E	L	A	K	Y	F	K	Q	G	T	H	Q	I	D	W	L	V	S	G	S	A	L	F	S	.	G	E	L	K	T	N	L	K	V	W	K	S	S	I
Template Known Secondary structure																					G	G	G	G	G	G							S	S												S	S	S									G	G	G	G	S	.	S
Template Predicted Secondary structure																																																														.
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.		.	.	.	.	.	.	.	.	230	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions