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Job DescriptionP37678
Confidence94.03%DateThu Jan 5 11:56:52 GMT 2012
Rank300Aligned Residues170
% Identity12%Templatec3bolB_
PDB info PDB header:transferaseChain: B: PDB Molecule:5-methyltetrahydrofolate s-homocysteine PDBTitle: cobalamin-dependent methionine synthase (1-566) from2 thermotoga maritima complexed with zn2+
Resolution1.85 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   14.....20.... .....30.........40.... .....50.........60.........70.........80........
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Query Sequence  SLEAAQRDVTL. LKDSVDIVEAGTILCLNEGL. . . . GAVKALREQCPDKIIVADWKVADAGETLAQQAFGAGANWMTIIC
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Template Sequence  NEEIVIKEAKTQVEKGAEVLDVNFGIESQIDVRYVEKIVQTLPYVS. NVPLSLDI. . . QNVDLTERALRAYPGRSLFNSA
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TT
S
SSGGGS
T.
S

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   338.340.........350.........360.........370.........380... ......390. ........400.........410...
 
   8990.........100.........110.... .....120.. .......130 .........140.........150......
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Query Sequence  AAPLATVEKGHAMAQRCGGEIQIELF. . . . GNWTLDDA. . . . . . . RDWHRIGV. RQAIYHRGRDAQASGQQWGEADLARM
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Template Sequence  KVDEEELEMKINLLKKYGGTLIVLLMGKDVPKSFEERKEYFEKALKILERHDFSDRVIFDPGVLPLGAEGKP. VEVLKTI
Template Known Secondary structure  S


S
SSS


STT
TTS




GGGT

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   414.....420.........430.........440.........450.........460.........470.........480..... ....490..
 
   157..160.........170...... ...180.........190
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Query Sequence  KALSDIGLELSITGGITPAD. . . . . . . . . . . . LPLFKDIRVKAFIA
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Template Sequence  EFISSKGFNTTV. . GLSNLSFLPDRSYYNTAFLVLGISKGLSSAIM
Template Known Secondary structure  TT

B

..BGGGTT


STT

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   493......500.... .....510.........520.........530......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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