Job Description P37678 Confidence 96.08% Date Thu Jan 5 11:56:52 GMT 2012 Rank 262 Aligned Residues 172 % Identity 16% Template c3bg5C_ PDB info PDB header:ligase Chain: C: PDB Molecule:pyruvate carboxylase; PDBTitle: crystal structure of staphylococcus aureus pyruvate2 carboxylase Resolution 2.80 Å

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		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.		.	.	30	.	.	.	.							.	.	.	.	.					40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.											.	.	70
Predicted Secondary structure																		.								.	.	.	.	.	.						.	.	.	.																													.	.	.	.	.	.	.	.	.	.
Query SS confidence																		.								.	.	.	.	.	.						.	.	.	.																													.	.	.	.	.	.	.	.	.	.
Query Sequence		H	S	S	L	E	A	A	Q	R	D	V	T	L	L	K	D	.	S	V	D	I	V	E	A	.	.	.	.	.	.	G	T	I	L	C	.	.	.	.	L	N	E	G	L	G	A	V	K	A	L	R	E	Q	C	P	D	K	I	I	V	A	D	W	K	V	A	D	.	.	.	.	.	.	.	.	.	.	A	G	E
Query Conservation																		.								.	.	.	.	.	.						.	.	.	.																													.	.	.	.	.	.	.	.	.	.
Alig confidence																		.								.	.	.	.	.	.						.	.	.	.																													.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	V	R	T	K	D	M	I	N	I	A	S	K	T	A	D	V	F	K	D	G	F	S	L	E	M	W	G	G	A	T	F	D	V	A	Y	N	F	L	K	E	N	P	W	E	R	L	E	R	L	R	K	A	I	P	N	V	L	F	Q	M	L	L	R	A	S	N	A	V	G	Y	K	N	Y	P	D	N	V	I	H
Template Known Secondary structure											T								T	T	T	S	S							T	T								T	S																	S	S							B	G	G	G	B	T	S	S	S
Template Predicted Secondary structure
Template SS confidence
		581	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660
		71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.		.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.												.	.	.	.	.	.	120					.	.	.	.	.	.	.	.	.	130	.	.	.	.
Predicted Secondary structure																									.																					.	.	.	.	.	.	.	.	.	.	.								.	.	.	.
Query SS confidence																									.																					.	.	.	.	.	.	.	.	.	.	.								.	.	.	.
Query Sequence		T	L	A	Q	Q	A	F	G	A	G	A	N	W	M	T	I	I	C	A	A	P	L	A	.	T	V	E	K	G	H	A	M	A	Q	R	C	G	G	E	I	Q	I	E	L	.	.	.	.	.	.	.	.	.	.	.	F	G	N	W	T	L	D	.	.	.	.	D	A	R	D	W	H	R	I	G	V	R	Q	A	I
Query Conservation																									.																					.	.	.	.	.	.	.	.	.	.	.								.	.	.	.
Alig confidence																									.																					.	.	.	.	.	.	.	.	.	.	.								.	.	.	.
Template Conservation
Template Sequence		K	F	V	Q	E	S	A	K	A	G	I	D	V	F	R	I	F	D	S	L	N	W	V	D	Q	M	K	V	A	N	E	A	V	Q	E	A	G	K	I	S	E	G	T	I	C	Y	T	G	D	I	L	N	P	E	R	S	N	I	Y	T	L	E	Y	Y	V	K	L	A	K	E	L	E	R	E	G	F	H	I	L	A
Template Known Secondary structure											T									T	T			G	G	G	G										T	T											S		T	T		T	T	T		S	S	S															T	T		S
Template Predicted Secondary structure
Template SS confidence
		661	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740
		135	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.		.	.	.	.	.	.	.					.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.
Predicted Secondary structure																													.								.	.	.	.
Query SS confidence																													.								.	.	.	.
Query Sequence		Y	H	R	G	R	D	A	Q	A	S	G	Q	Q	W	G	E	A	D	L	A	R	M	K	A	L	S	D	.	I	G	L	E	L	S	I	.	.	.	.	T	G	G	I	T	P	A	D	L	P	L	F	K	D	I	R	V	K	A	F
Query Conservation																													.								.	.	.	.
Alig confidence						.	.	.	.	.																			.								.	.	.	.
Template Conservation						.	.	.	.	.
Template Sequence		I	K	D	M	.	.	.	.	.	A	G	L	L	K	P	K	A	A	Y	E	L	I	G	E	L	K	S	A	V	D	L	P	I	H	L	H	T	H	D	T	S	G	N	G	L	L	T	Y	K	Q	A	I	D	A	G	V	D	I	I
Template Known Secondary structure					T	.	.	.	.	.	T	S																T	T			S									T	T	S												T	T
Template Predicted Secondary structure						.	.	.	.	.
Template SS confidence
		740	.	.	.						.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions