Job Description P37678 Confidence 79.99% Date Thu Jan 5 11:56:52 GMT 2012 Rank 414 Aligned Residues 159 % Identity 19% Template c3b8iF_ PDB info PDB header:lyase Chain: F: PDB Molecule:pa4872 oxaloacetate decarboxylase; PDBTitle: crystal structure of oxaloacetate decarboxylase from pseudomonas2 aeruginosa (pa4872) in complex with oxalate and mg2+. Resolution 1.90 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		44	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.			.	.	.	.	.	.	70	.	.			.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.															90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
Predicted Secondary structure																						.	.										.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																						.	.										.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	G	A	V	K	A	L	R	E	Q	C	P	D	K	I	I	V	A	D	W	.	.	K	V	A	D	A	G	E	T	L	.	.	A	Q	Q	A	F	G	A	G	A	N	W	M	T	I	I	C	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	P	L	A	T	V	E	K	G	H	A	M	A	Q	R	C
Query Conservation																						.	.										.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence													.									.	.										.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation													.
Template Sequence		V	E	Q	A	T	R	I	G	R	V	A	.	R	L	P	V	I	A	D	A	D	H	G	Y	G	N	A	L	N	V	M	R	T	V	V	E	L	E	R	A	G	I	A	A	L	T	I	E	D	T	L	L	P	A	Q	F	G	R	K	S	T	D	L	I	C	V	E	E	G	V	G	K	I	R	A	A	L	E	A	R
Template Known Secondary structure										T	T		.	S	S							T	T		S	S	S															T		S							B			S			T	T			S			B
Template Predicted Secondary structure													.
Template SS confidence
		71	.	.	.	.	.	.	.	.	80	.		.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
			106	.	.	.	110	.	.	.	.	.	.	.	.								.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
Predicted Secondary structure		.														.	.	.	.	.	.	.
Query SS confidence		.														.	.	.	.	.	.	.
Query Sequence		.	G	G	E	I	Q	I	E	L	F	G	N	W	T	.	.	.	.	.	.	.	L	D	D	A	R	D	W	H	R	I	G	V	R	Q	A	I	Y	H	R	G	R	D	A	Q	A	S	G	Q	Q	W	G	E	A	D	L	A	R	M	K	A	L	S	D	I	G	L	E	L	S	I	T	G	G	I	T	P	A	D	L
Query Conservation		.														.	.	.	.	.	.	.
Alig confidence		.														.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.
Template Conservation																																													.	.	.	.	.	.	.	.	.
Template Sequence		V	D	P	A	L	T	I	I	A	R	T	N	A	E	L	I	D	V	D	A	V	I	Q	R	T	L	A	Y	Q	E	A	G	A	D	G	I	C	L	V	G	V	R	D	.	.	.	.	.	.	.	.	.	F	A	H	L	E	A	I	A	E	H	L	H	I	P	L	M	L	V	T	Y	G	N	P	Q	L	R	D	D
Template Known Secondary structure		S	S	T	T	S								T	T	T	S																T		S									S	.	.	.	.	.	.	.	.	.									T	T			S							T	T		G	G	G
Template Predicted Secondary structure																																													.	.	.	.	.	.	.	.	.
Template SS confidence
		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.										.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220
		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	L	F	K	D	I	R	V	K	A	F	I	A	G	R	A	L	A	G	A	A	N	P	A	Q	V	A	G	D	F	H	A	Q	I	D	A	I	W	G	G
Query Conservation
Alig confidence																						.	.	.	.	.
Template Conservation																						.	.	.	.	.
Template Sequence		A	R	L	A	R	L	G	V	R	V	V	V	N	G	H	A	A	Y	F	A	.	.	.	.	.	A	I	K	A	T	Y	D	C	L	R	E	E	R	G	A
Template Known Secondary structure							T	T								S						.	.	.	.	.														T
Template Predicted Secondary structure																						.	.	.	.	.
Template SS confidence
		221	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240						.	.	.	.	.	.	.	.	.	250	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions