|   |
9 | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | |
. | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | |
|
|
. | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | |
|
80 | . | . |
Predicted Secondary structure |   |
 |
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|  |  |  |  |  |  |  |  |  |  | . |  |
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|
|  |  |  |  |
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |
| . | . | . |
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |
| . | . |
|
|
|
Query SS confidence |   |
|
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| . |
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| . |
. |
. |
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| . |
. |
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|
|
Query Sequence |   |
A | L | D | H | S | S | L | E | A | A | Q | R | D | V | T | L | . |
L | K | D | S | V | D | I | V | E | A | G | T | I | L | C | L | N | E | G | L | G | A | V | K | A | L | R | E | Q | C | . |
. |
. |
P | D | K | I | I | V | A | D | W | K | V | A | D | A | G | E | T | L | A | Q | Q | A | F | G | A | . |
. |
G | A | N |
Query Conservation |   |
|
|
|   |   |   |   |
|   |   |   |   |
|   |   |   | . |   |   |   |   |
|
|   |
|
|
|
|   |   |
|   |   |   |   |
|   |   |   |
|   |   |
|   |   |   |   | . | . | . |   |   |   |   |
|   |   |
|   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   | . | . |
|
|
|
Alig confidence |   |
|
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|
|
| . |
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| . | . | . |
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| . | . | . | . |
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|
| . | . |
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|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |
|
|
|
|
|
|
|
|   |   |   |   |   |   |   |
|   |
|   |
|   |   |
|
|   |   |
|   |   |   |   |   |
|
|
|
|
|
| . | . | . | . |
|   |   |   |   |
|   |
|
|
|
|   |   |   |   |
|   |   |
Template Sequence |   |
A | I | L | N | K | D | P | R | P | I | Q | E | W | A | R | R | Q | A | E | K | G | A | H | Y | L | D | V | N | T | G | P | T | A | D | D | P | V | R | V | M | E | W | L | V | K | T | I | Q | E | V | V | D | L | P | C | C | L | D | . |
. |
. |
. |
S | T | N | P | D | A | I | E | A | G | L | K | V | H | R | G | H | A |
Template Known Secondary structure |   |
 |  |  | T | T |
|
|  |  |  |  |  |  |  |  |  |  |  |  | T | T |
| S |  |  |  |  |  |
|
| S |
| S | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  | . | . | . | . |
| S |
|  |  |  |  |  |  |  |  |  |  |
|
| S |
|
|
Template Predicted Secondary structure |   |
 |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
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|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  | . | . | . | . |
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |
Template SS confidence |   |
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  |   |
19 | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | |
|
|
|
. | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . |
  |
  |   |
83 | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | |
|
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120 | . | . | . | . | . | . | . | . | . | 130 | |
|
. | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
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|
|
|  | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |
|
|
| . | . |
|  |  |  |  |  |  |
|
|
|
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|
|
|
|
Query SS confidence |   |
|
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|
|
|
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|
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|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
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|
|
|
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|
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| . |
. |
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|
|
Query Sequence |   |
W | M | T | I | I | C | A | A | P | L | A | T | V | E | K | G | H | A | M | A | Q | R | C | G | G | E | I | Q | I | E | L | F | G | N | W | T | L | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
D | D | A | R | D | W | H | R | I | G | V | . |
. |
R | Q | A | I | Y | H | R | G | R | D | A | Q | A | S | G | Q | Q | W |
Query Conservation |   |
  |
|   |
|
|   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |
|   |
|   |   |   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   | . | . |   |   |
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
Alig confidence |   |
|
|
| . |
|
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|
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| . | . | . | . | . | . | . | . | . | . | . | . |
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|
| . | . |
|
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|
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|
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|
|
|
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|
|
|
|
Template Conservation |   |
|
|
| . |
|
|
|   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |   |   |   |   |
|
|   |
|   |   |   |   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |
|
|   |   |
|   |
|
|
|
|
|
|
|   |   |   |
|   |   |   |
|   |
Template Sequence |   |
M | I | N | . |
S | T | S | A | D | Q | W | K | M | D | I | F | F | P | M | A | K | K | Y | E | A | A | I | I | G | L | T | M | N | E | K | G | V | P | K | D | A | N | D | R | S | Q | L | A | M | E | L | V | A | N | A | D | A | H | G | I | P | M | T | E | L | Y | I | D | P | L | I | L | P | V | N | V | A | Q | E | H |
Template Known Secondary structure |   |
 |  |  | . |  |  |
| S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
|  |  |  |  |  | S |
| B | T | T | B |
|
|
| S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
| G | G | G |  |  |  |  |
|
|
|
|
| T | T | T | S | T |  |  |
Template Predicted Secondary structure |   |
 |  |  | . |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
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|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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  |   |
95 | . | . | |
. | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . |
  |
  |   |
149 | 150 | . | . | . | . | . | . | . | . | . | 160 | |
|
|
. | . | . | . | . | . | . | . | . | 170 | . | |
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 |
Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |
| . | . | . |
|
|
|
|  |  |  |  |  |
|
| . | . | . | . | . | . | . | . | . | . | . |
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
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|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
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|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | E | A | D | L | A | R | M | K | A | L | S | . |
. |
. |
D | I | G | L | E | L | S | I | T | G | G | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
I | T | P | A | D | L | P | L | F | K | D | I | R | V | K | A | F | I | A |
Query Conservation |   |
  |   |   |   |   |   |   |
|
|   |   |   | . | . | . |   |   |   |   |   |
|   |
|   |
|
| . | . | . | . | . | . | . | . | . | . | . |
|   |   |   |   |   |   |   |   |   |   |   |
|
|
|   |
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
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|
|
| . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |
|
|   |
|
|   |
|   |   |   |   |   |   |
|   |   |   |
|   |
|   |
|
|   |
|
|
|   |
|   |
|   |   |   |   |   |   |
|
|   |   |
|   |   |   |
|
|
|   |
|
|
|
Template Sequence |   |
A | V | E | V | L | E | T | I | R | Q | I | K | L | M | A | N | P | A | P | R | T | V | L | G | L | S | N | V | S | Q | K | C | P | D | R | P | L | I | N | R | T | Y | L | V | M | A | M | T | A | G | L | D | A | A | I | M |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  | T | T | S | S | S | S |
|
|  |  |  |  |  | G | G | G | G | G | T | T |
| S | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
|
|  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
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|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
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|
|
|
|
|
|
  |   |
174 | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . |
  |