Job Description P37678 Confidence 80.99% Date Thu Jan 5 11:56:52 GMT 2012 Rank 407 Aligned Residues 201 % Identity 19% Template c2y5sA_ PDB info PDB header:transferase Chain: A: PDB Molecule:dihydropteroate synthase; PDBTitle: crystal structure of burkholderia cenocepacia dihydropteroate2 synthase complexed with 7,8-dihydropteroate. Resolution 1.95 Å

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		2	.	.	.	.	.	.	.	10	.	.	.		.	.	.	.	.	.	20	.	.	.	.		.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.													.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.
Predicted Secondary structure														.												.																				.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence														.												.																				.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	R	P	L	L	Q	L	A	L	D	H	S	.	S	L	E	A	A	Q	R	D	V	T	L	.	L	K	D	S	V	D	I	V	E	A	G	T	I	L	C	L	N	E	G	.	.	.	.	.	.	.	.	.	.	.	.	L	G	A	V	K	A	L	R	E	Q	C	P	D	K	I	I	V	A	D	W	K	V	A	D
Query Conservation														.												.																				.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence														.												.																				.	.	.	.	.	.	.	.	.	.	.	.											.	.								.	.	.	.
Template Conservation																																																																				.	.								.	.	.	.
Template Sequence		E	R	P	L	V	M	G	I	L	N	A	T	P	A	R	D	D	A	L	R	R	A	E	R	M	I	A	E	G	A	D	L	L	D	I	G	G	E	S	T	R	P	G	A	P	P	V	P	L	D	E	E	L	A	R	V	I	P	L	V	E	A	L	R	P	L	.	.	N	V	P	L	S	I	D	.	.	.	.	T
Template Known Secondary structure		S	S													T	T												T	T		S						S	S			S	T	T																					G	G	G	.	.		S						.	.	.	.
Template Predicted Secondary structure																																																																				.	.								.	.	.	.
Template SS confidence
		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.			.	.	.	.	.	90	.					.
		68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120																						.	.	.	.	.	.
Predicted Secondary structure																																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	G	E	T	L	A	Q	Q	A	F	G	A	G	A	N	W	M	T	I	I	C	A	A	P	L	A	T	V	E	K	G	H	A	M	A	Q	R	C	G	G	E	I	Q	I	E	L	F	G	N	W	T	L	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	A	R	D	W	H
Query Conservation																																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																		.	.									.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																		.	.									.
Template Sequence		Y	K	P	A	V	M	R	A	A	L	A	A	G	A	D	L	.	.	I	N	D	I	W	G	F	R	.	Q	P	G	A	I	D	A	V	R	D	G	N	S	G	L	C	A	M	H	M	L	G	E	P	Q	T	M	Q	V	G	E	P	D	Y	G	D	V	V	T	D	V	R	D	F	L	A	A	R	A	Q	A	L	R
Template Known Secondary structure														T		S		.	.				T	T	T	T		.	S	T	T						S	S	S	S												T	T	T	T								S	S
Template Predicted Secondary structure																		.	.									.
Template SS confidence
		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.			.	120	.	.	.	.	.	.		.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
		127	.	.	130			.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.						160	.	.	.	.	.	.	.	.	.												170	.	.	.	.	.									.	.	.	.	180
Predicted Secondary structure						.	.																														.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.							.	.	.	.	.	.	.	.
Query SS confidence						.	.																														.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.							.	.	.	.	.	.	.	.
Query Sequence		R	I	G	V	.	.	R	Q	A	I	Y	H	R	G	R	D	A	Q	A	S	G	Q	Q	W	G	E	A	D	L	A	R	M	K	A	L	.	.	.	.	.	S	D	I	G	L	E	L	S	I	T	.	.	.	.	.	.	.	.	.	.	.	G	G	I	T	P	A	.	.	.	.	.	.	.	.	D	L	P	L	F
Query Conservation						.	.																														.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.							.	.	.	.	.	.	.	.
Alig confidence						.	.																														.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.							.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	A	G	V	A	A	E	R	I	C	V	D	P	G	F	G	F	G	K	A	V	V	D	D	N	Y	A	L	L	A	A	L	P	D	T	A	P	A	R	P	D	G	R	A	Y	P	I	L	A	G	M	S	R	K	S	M	L	G	A	V	I	G	G	K	P	P	L	E	R	V	A	A	S	V	A	A	A	L	C	A
Template Known Secondary structure			T	T			G	G	G							T	T	S	S	S		T	T									T	G	G	G	G	S		B		T	T	S	S	B			B					T	T						T	T	T	T	S			G	G	G
Template Predicted Secondary structure
Template SS confidence
		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.
		181	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	D	I	R	V	K	A	F	I	A	G	R	A	L	A	G	A	A	N	P	A	Q	V	A	G	D	F	H	A	Q	I	D	A	I	W	G	G	A	R
Query Conservation
Alig confidence															.	.	.	.	.	.	.	.
Template Conservation															.	.	.	.	.	.	.	.
Template Sequence		V	E	R	G	A	A	I	V	R	V	H	D	V	.	.	.	.	.	.	.	.	A	A	T	V	D	A	L	S	V	W	N	A	V	R	A	A	A	R
Template Known Secondary structure				T	T		S					S			.	.	.	.	.	.	.	.																		T
Template Predicted Secondary structure															.	.	.	.	.	.	.	.
Template SS confidence
		260	.	.	.	.	.	.	.	.	.	270	.	.									.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions