|   |
44 | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | |
|
. | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | |
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. | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
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|
|  |  |  |  |  |  |  | . | . |  |
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|
|  |  |  |  |  |  |  |  |  |  |
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|  |  |  |  |
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|
|  | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |
Query SS confidence |   |
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| . |
. |
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| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
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Query Sequence |   |
L | G | A | V | K | A | L | R | E | Q | C | P | D | K | I | I | V | A | D | W | K | . |
. |
V | A | D | A | G | E | T | L | A | Q | Q | A | F | G | A | G | A | N | W | M | T | I | I | C | A | A | P | L | . |
. |
. |
. |
. |
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. |
. |
. |
. |
. |
. |
A | T | V | E | K | G | H | A | M | A | Q | R | C | G | G | E | I |
Query Conservation |   |
  |   |   |
|   |   |
|   |   |   |   |   |   |   |   |
|   |   |
|   |
| . | . |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
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|
|   |
|   |
|
|   |   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . |   |   |
|   |   |   |   |   |   |   |   |   |   |
|   |   |   |
Alig confidence |   |
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| . |
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|
| . | . |
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| . | . | . | . | . | . | . | . | . | . | . | . |
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Template Conservation |   |
  |   |   |   |   |   |
|   |   |
|   | . |   |   |
|
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|   |
|   |
|
|
|   |   |   |   |   |   |
|   |   |   |   |   |
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|   |
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|
|   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |
|
|   |
|
|   |   |
|   |   |   |   |   |   |   |   |
Template Sequence |   |
X | A | V | V | K | K | I | T | S | A | V | . |
S | I | P | V | S | V | D | V | E | S | G | Y | G | L | S | P | A | D | L | I | A | Q | I | L | E | A | G | A | V | G | I | N | V | E | D | V | V | H | S | E | G | K | R | V | R | E | A | Q | E | H | A | D | Y | I | A | A | A | R | Q | A | A | D | V | A | G | V | D | V |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
| . | S | S |
|  |  |  |  |
| T | T |
| T | T |
|
|  |  |  |  |  |  |  |  |  |  | T | T |
|
|  |  |  |  |
| S |  |  | G | G | G | T | T |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
|
|
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
| . |
|
|  |  |  |  |  |  |
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|  |  |  |  |  |  |  |  |  |  |
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|  |  |  |  |  |  |
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|  |  |
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|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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|  |
Template SS confidence |   |
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  |   |
68 | . | 70 | . | . | . | . | . | . | . | . | |
. | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . |
  |
  |   |
110 | . | . | . | . | . | . | . | |
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. | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | |
|
. | 170 | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|  |  |  |  |  |  |  |  |  |
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|  |  |  |  |  |  |
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|
|  |  |  |  |  |  |  |  |  |  |
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|
|  |  |  |  | . | . |  |
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|
Query SS confidence |   |
|
|
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|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
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. |
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| . |
. |
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Query Sequence |   |
Q | I | E | L | F | G | N | W | . |
. |
. |
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. |
. |
. |
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. |
. |
. |
. |
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. |
T | L | D | D | A | R | D | W | H | R | I | G | V | R | Q | A | I | Y | H | R | G | R | D | A | Q | A | S | G | Q | Q | W | G | E | A | D | L | A | R | M | K | A | L | S | D | I | G | L | E | L | S | I | . |
. |
T | G | G | I | T |
Query Conservation |   |
  |
|   |
|   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |
|
|   |   |   |   |   |   |   |   |
|   |
| . | . |   |
|
|
|   |
Alig confidence |   |
|
|
|
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|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
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| . | . | . | . | . | . | . | . | . |
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|
|
| . | . |
|
|
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|
|
Template Conservation |   |
  |
|   |
|
|
|
|
|   |   |   |
|   |   |   |   |   |   |   |   |   |
|
|
|   |
|
|   |
|
|   |
|
|
|
|
|   |
|
|
|   |   |   |   |   | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |
|   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
V | I | N | G | R | T | D | A | V | K | L | G | A | D | V | F | E | D | P | X | V | E | A | I | K | R | I | K | L | X | E | Q | A | G | A | R | S | V | Y | P | V | G | L | S | T | . |
. |
. |
. |
. |
. |
. |
. |
. |
A | E | Q | V | E | R | L | V | D | A | V | S | V | P | V | N | I | T | A | H | P | V | D | G | H | G |
Template Known Secondary structure |   |
 |  |  |  |  |  |
|  |  |  |  |
| T | T | T | S | S | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
| S |  |  |  |  |
|
|
|
| S | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  | T | T |
| S | S |
| B |  |  |  |
| B | T | T | T | B | B | T |
Template Predicted Secondary structure |   |
 |  |  |  |
|
|
|  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
| . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
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|
|
Template SS confidence |   |
|
|
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  |   |
147 | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | |
|
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|
. | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . |
  |
  |   |
174 | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
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|
Query Sequence |   |
P | A | D | L | P | L | F | K | D | I | R | V | K | A | F | I | A | G | R | A | L | A | G | A | A | N | P | A | Q | V | A | G | D | F | H | A | Q | I | D | A | I |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |
|
|
|   |
|
|
|
|
|
|
|   |   |
|   |
|
|   |   |   |
|   |   |   |   |   |   |
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
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|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |
|   |   |
|
|   |   |   |
|
|   |
|   |   |   |   |   | . | . | . | . | . |
|   |   |
|   |
|   |   |   |
|   |
|   |
Template Sequence |   |
A | G | D | L | A | T | L | A | G | L | G | V | R | R | V | T | F | G | P | L | W | Q | K | . |
. |
. |
. |
. |
W | L | A | A | T | S | A | Q | Q | L | K | G | W |
Template Known Secondary structure |   |
T | B |
|  |  |  |  |  |  | T | T |
|
|  |  |  |
| T | T |  |  |  |  | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  | G | G | G |
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|  |  |  |  |  | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |
|
|
|
Template SS confidence |   |
|
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  |   |
218 | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | |
|
|
|
|
. | . | . | . | . | . | . | . | . | 250 | . | . | . |
  |