Return to main results Retrieve Phyre Job Id

Job DescriptionP37678
Confidence87.27%DateThu Jan 5 11:56:52 GMT 2012
Rank364Aligned Residues114
% Identity18%Templatec2qdeA_
PDB info PDB header:lyaseChain: A: PDB Molecule:mandelate racemase/muconate lactonizing enzyme family PDBTitle: crystal structure of mandelate racemase/muconate lactonizing family2 protein from azoarcus sp. ebn1
Resolution1.93 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   8.10. ........20........ .30.........40.........50.........60.........70.........80...
Predicted Secondary structure 

...





.















Query SS confidence 



. . .
















.






















































Query Sequence  LALD. . . HSSLEAAQRDVTLLKDS. VDIVEAGTILCLNEGLGAVKALREQCPDKIIVADWKVADAGETLAQQAFGAGANW
Query Conservation 



...    
    
       .

 



  
    
   
  
        
  
 
  
            


 
Alig confidence 



...
















.




...

















.







.


















Template Conservation 
 



       
      
    
  

...

    
      
    . 



 

.          

     
 
Template Sequence  LFIDINGAWTYDQALTTIRALEKYNLSKIE. . . QPLPAWDLDGMARLRGKV. ATPIYADE. SAQELHDLLAIINKGAADG
Template Known Secondary structure 
TT


GGG

S
...

S
TT
TT
.SS
ST.T

ST

S
Template Predicted Secondary structure 








...







.




.








Template SS confidence 















































































   192.......200.........210.........220. ........230......... 240....... ..250.........260......
 
   84.. ...90.........100.........110.........120......
Predicted Secondary structure  ..












Query SS confidence 


. .







































Query Sequence  MTI. . ICAAPLATVEKGHAMAQRCGGEIQIELFGNWTLDDARDWH
Query Conservation 
 
..
       
          
    
 
             
Alig confidence 


..







































Template Conservation 
  
    



    
   
   

           
  

  
Template Sequence  LMIKTQKAGGLLKAQRWLTLARLANLPVICGCMVGSGLEASPAAH
Template Known Secondary structure 
TST




S

Template Predicted Secondary structure 















Template SS confidence 












































   267..270.........280.........290.........300.........310.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions