Job Description P37678 Confidence 100.00% Date Thu Jan 5 11:56:52 GMT 2012 Rank 15 Aligned Residues 207 % Identity 17% Template c2qcnA_ PDB info PDB header:lyase Chain: A: PDB Molecule:uridine 5'-monophosphate synthase; PDBTitle: covalent complex of the orotidine-5'-monophosphate decarboxylase2 domain of human ump synthase with 6-iodo-ump Resolution 1.85 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.			.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																								.	.																								.
Query SS confidence																																																								.	.																								.
Query Sequence		S	R	P	L	L	Q	L	A	L	D	H	S	S	L	E	A	A	Q	R	D	V	T	L	L	K	D	S	V	D	I	V	E	A	G	T	I	L	C	L	N	E	G	L	G	A	V	K	A	L	R	E	Q	C	P	.	.	D	K	I	I	V	A	D	W	K	V	A	D	A	G	E	T	L	A	Q	Q	A	F	G	.
Query Conservation																																																								.	.																								.
Alig confidence																																																								.	.																								.
Template Conservation
Template Sequence		K	E	T	N	L	C	L	S	A	D	V	S	L	A	R	E	L	L	Q	L	A	D	A	L	G	P	S	I	C	M	L	K	T	H	V	D	I	L	N	D	F	T	L	D	V	M	K	E	L	I	T	L	A	K	C	H	E	F	L	I	F	E	D	R	K	F	A	D	I	G	N	T	V	K	K	Q	Y	E	G	G
Template Known Secondary structure			T										S													G	G	G		S						G	G	G		T	T																	T											S												T
Template Predicted Secondary structure
Template SS confidence
		250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.
							79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
Predicted Secondary structure		.	.	.	.	.
Query SS confidence		.	.	.	.	.
Query Sequence		.	.	.	.	.	A	G	A	N	W	M	T	I	I	C	A	A	P	L	A	T	V	E	K	G	H	A	M	A	Q	R	C	G	G	E	I	Q	I	E	L	F	G	N	W	T	L	D	D	A	R	D	W	H	R	I	G	V	R	Q	A	I	Y	H	R	G	R	D	A	Q	A	S	G	Q	Q	W	G	E	A	D	L
Query Conservation		.	.	.	.	.
Alig confidence		.	.	.	.	.																																		.	.																																						.	.	.
Template Conservation																																								.	.																																						.	.	.
Template Sequence		I	F	K	I	A	S	W	A	D	L	V	N	A	H	V	V	P	G	S	G	V	V	K	G	L	Q	E	V	G	L	P	L	H	R	G	C	L	L	.	.	I	A	E	M	S	S	T	G	S	L	A	T	G	D	Y	T	R	A	A	V	R	M	A	E	E	H	S	E	F	V	V	G	F	I	S	G	S	.	.	.
Template Known Secondary structure		T	T		G	G	G	T		S						S	T	T		T											T	T	T	T						.	.					S	S	T	T					T												T	T	T	T	T							S	S	.	.	.
Template Predicted Secondary structure																																								.	.																																						.	.	.
Template SS confidence
		330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.			.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170											.	.	.	.	.	.	.	.	.	180	.		.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.												.
Query SS confidence																			.	.	.	.	.	.	.	.	.	.												.
Query Sequence		A	R	M	K	A	L	S	D	I	G	L	E	L	S	I	T	G	.	.	.	.	.	.	.	.	.	.	G	I	T	P	A	D	L	P	L	F	K	.	D	I	R	V	K	A	F	I	A	G	R	A	L	A	G	A	A	N	P	A	Q	V	A	G	D	F	H	A	Q	I	D	A	I	W	G	G	A	R
Query Conservation																			.	.	.	.	.	.	.	.	.	.												.
Alig confidence		.	.	.															.	.	.	.	.	.	.	.	.	.												.																													.	.	.
Template Conservation		.	.	.																																																																	.	.	.
Template Sequence		.	.	.	R	V	S	M	K	P	E	F	L	H	L	T	P	G	V	Q	L	E	A	G	G	D	N	L	G	Q	Q	Y	N	S	P	Q	E	V	I	G	K	R	G	S	D	I	I	I	V	G	R	G	I	I	S	A	A	D	R	L	E	A	A	E	M	Y	R	K	.	.	.	A	A	W	E	A	Y	L
Template Known Secondary structure		.	.	.						T	T	S						S	B		S	S	S		B		T	T	S		B		B							T	T	S			S					S					T	S	S												.	.	.
Template Predicted Secondary structure		.	.	.																																																																	.	.	.
Template SS confidence
					405	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.				.	470	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions