Job Description P37678 Confidence 97.26% Date Thu Jan 5 11:56:52 GMT 2012 Rank 216 Aligned Residues 172 % Identity 15% Template c2nx9B_ PDB info PDB header:lyase Chain: B: PDB Molecule:oxaloacetate decarboxylase 2, subunit alpha; PDBTitle: crystal structure of the carboxyltransferase domain of the2 oxaloacetate decarboxylase na+ pump from vibrio cholerae Resolution 1.70 Å

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		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.		.	.	30	.	.	.	.	.	.	.	.									.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.											.	.	.	.	.	.	70	.	.
Predicted Secondary structure																		.												.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.
Query SS confidence																		.												.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.
Query Sequence		H	S	S	L	E	A	A	Q	R	D	V	T	L	L	K	D	.	S	V	D	I	V	E	A	G	T	I	L	.	.	.	.	.	.	.	.	C	L	N	E	G	L	G	A	V	K	A	L	R	E	Q	C	P	D	K	I	I	V	A	D	W	.	.	.	.	.	.	.	.	.	.	K	V	A	D	A	G	E	T	L
Query Conservation																		.												.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.
Alig confidence																		.												.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	L	R	I	D	D	M	L	P	I	A	Q	Q	L	D	Q	I	G	Y	W	S	L	E	C	W	G	G	A	T	F	D	S	C	I	R	F	L	G	E	D	P	W	Q	R	L	R	L	L	K	Q	A	M	P	N	T	P	L	Q	M	L	L	R	G	Q	N	L	L	G	Y	R	H	Y	A	D	D	V	V	D	T	F
Template Known Secondary structure									T	T	T						T	S			S							T	T									T																T	T	S								G	G	G	T	T	S	S	S
Template Predicted Secondary structure
Template SS confidence
		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.		.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.									.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.
Predicted Secondary structure																					.																												.	.	.	.	.	.	.	.
Query SS confidence																					.																												.	.	.	.	.	.	.	.
Query Sequence		A	Q	Q	A	F	G	A	G	A	N	W	M	T	I	I	C	A	A	P	.	L	A	T	V	E	K	G	H	A	M	A	Q	R	C	G	G	E	I	Q	I	E	L	F	G	N	W	T	.	.	.	.	.	.	.	.	L	D	D	A	R	D	W	H	R	I	G	V	R	Q	A	I	Y	H	R	G	R	D	A	Q	A
Query Conservation																					.																												.	.	.	.	.	.	.	.
Alig confidence																					.																												.	.	.	.	.	.	.	.																					.	.	.	.	.
Template Conservation																																																																													.	.	.	.	.
Template Sequence		V	E	R	A	V	K	N	G	M	D	V	F	R	V	F	D	A	M	N	D	V	R	N	M	Q	Q	A	L	Q	A	V	K	K	M	G	A	H	A	Q	G	T	L	C	Y	T	T	S	P	V	H	N	L	Q	T	W	V	D	V	A	Q	Q	L	A	E	L	G	V	D	S	I	A	L	K	D	M	.	.	.	.	.
Template Known Secondary structure									T									T	T																	T													T	T																T	T		S							S	.	.	.	.	.
Template Predicted Secondary structure																																																																													.	.	.	.	.
Template SS confidence
		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
		144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.		.	.	.	.	.	.	.					.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.
Predicted Secondary structure																				.								.	.	.	.
Query SS confidence																				.								.	.	.	.
Query Sequence		S	G	Q	Q	W	G	E	A	D	L	A	R	M	K	A	L	S	D	.	I	G	L	E	L	S	I	.	.	.	.	T	G	G	I	T	P	A	D	L	P	L	F	K	D	I	R	V	K	A	F
Query Conservation																				.								.	.	.	.
Alig confidence																				.								.	.	.	.
Template Conservation
Template Sequence		A	G	I	L	T	P	Y	A	A	E	E	L	V	S	T	L	K	K	Q	V	D	V	E	L	H	L	H	C	H	S	T	A	G	L	A	D	M	T	L	L	K	A	I	E	A	G	V	D	R	V
Template Known Secondary structure		S	S																		S		S									T	T	S												T	T		S
Template Predicted Secondary structure
Template SS confidence
		181	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions