Job Description P37678 Confidence 98.23% Date Thu Jan 5 11:56:52 GMT 2012 Rank 130 Aligned Residues 213 % Identity 15% Template c2d69B_ PDB info PDB header:lyase Chain: B: PDB Molecule:ribulose bisphosphate carboxylase; PDBTitle: crystal structure of the complex of sulfate ion and octameric2 ribulose-1,5-bisphosphate carboxylase/oxygenase (rubisco) from3 pyrococcus horikoshii ot3 (form-2 crystal) Resolution 1.90 Å

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		3	.	.	.	.	.	.	10	.	.	.				.	.	.	.	.	.	20	.	.	.	.	.	.	.		.	.	30	.	.	.	.	.	.	.	.	.											40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.
Predicted Secondary structure													.	.	.															.													.	.	.	.	.	.	.	.	.	.
Query SS confidence													.	.	.															.													.	.	.	.	.	.	.	.	.	.
Query Sequence		R	P	L	L	Q	L	A	L	D	H	S	.	.	.	S	L	E	A	A	Q	R	D	V	T	L	L	K	D	.	S	V	D	I	V	E	A	G	T	I	L	C	.	.	.	.	.	.	.	.	.	.	L	N	E	G	L	G	A	V	K	A	L	R	E	Q	C	P	D	K	I	I	V	A	D	W	K	V	A	D	A
Query Conservation													.	.	.															.													.	.	.	.	.	.	.	.	.	.
Alig confidence													.	.	.															.													.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	P	L	T	A	T	V	P	K	P	K	M	G	W	S	V	E	E	Y	A	E	I	A	Y	E	L	W	S	G	G	I	D	L	L	K	D	D	E	N	F	T	S	F	P	F	N	R	F	E	E	R	V	R	K	L	Y	R	V	R	D	R	V	E	A	E	T	G	E	T	K	E	Y	L	I	N	I	T	G	P	V
Template Known Secondary structure		S								S	S	S	S																		T		S						T	T				B	T	T	B																					S	S							B			S	S
Template Predicted Secondary structure
Template SS confidence
		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
		69	70	.	.			.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90		.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.									.	.	.	.	.			.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.
Predicted Secondary structure						.	.																			.																						.	.	.	.	.	.	.	.						.	.
Query SS confidence						.	.																			.																						.	.	.	.	.	.	.	.						.	.
Query Sequence		G	E	T	L	.	.	A	Q	Q	A	F	G	A	G	A	N	W	M	T	I	I	C	A	A	.	P	L	A	T	V	E	K	G	H	A	M	A	Q	R	C	G	G	E	I	Q	I	.	.	.	.	.	.	.	.	E	L	F	G	N	.	.	W	T	L	D	D	A	R	D	W	H	R	I	G	V	R	Q	A	I	Y
Query Conservation						.	.																			.																						.	.	.	.	.	.	.	.						.	.
Alig confidence						.	.																			.																						.	.	.	.	.	.	.	.						.	.
Template Conservation
Template Sequence		N	I	M	E	K	R	A	E	M	V	A	N	E	G	G	Q	Y	V	M	I	D	I	V	V	A	G	W	S	A	L	Q	Y	M	R	E	V	T	E	D	L	G	L	A	I	H	A	H	R	A	M	H	A	A	F	T	R	N	P	R	H	G	I	T	M	L	A	L	A	K	A	A	R	M	I	G	V	D	Q	I	H
Template Known Secondary structure														T	T																											T								T	T	T					S		T	T	S															T		S
Template Predicted Secondary structure
Template SS confidence
		232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.
		136	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.						.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.		.	.	.	.	.	.	.		190	.	.	.	.	.	.	.	.	.		200	.	.	.	.	.	.	.
Predicted Secondary structure																												.	.	.	.	.																						.								.											.
Query SS confidence																												.	.	.	.	.																						.								.											.
Query Sequence		H	R	G	R	D	A	Q	A	S	G	Q	Q	W	G	E	A	D	L	A	R	M	K	A	L	S	D	.	.	.	.	.	I	G	L	E	L	S	I	T	G	G	I	T	P	A	D	L	P	L	F	K	D	.	I	R	V	K	A	F	I	.	A	G	R	A	L	A	G	A	A	N	.	P	A	Q	V	A	G	D	F
Query Conservation																												.	.	.	.	.																						.								.											.
Alig confidence													.	.														.	.	.	.	.																						.								.											.
Template Conservation													.	.
Template Sequence		T	G	T	A	V	G	K	M	A	G	N	.	.	Y	E	E	I	K	R	I	N	D	F	L	L	S	K	W	E	H	I	R	P	V	F	P	V	A	S	G	G	L	H	P	G	L	M	P	E	L	I	R	L	F	G	K	D	L	V	I	Q	A	G	G	G	V	M	G	H	P	D	G	P	R	A	G	A	K	A	L
Template Known Secondary structure							S	S					.	.													S		B	T	T	B									S	S			G	G	G										S	S											T		T	T
Template Predicted Secondary structure													.	.
Template SS confidence
		312	.	.	.	.	.	.	.	320	.	.			.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.
		208	.	210	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	A	Q	I	D	A	I	W	G	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	D	A	I	D	A	A	I	E	G
Template Known Secondary structure											T
Template Predicted Secondary structure
Template SS confidence
		390	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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