Job Description P37678 Confidence 97.66% Date Thu Jan 5 11:56:52 GMT 2012 Rank 194 Aligned Residues 200 % Identity 14% Template c1yyaA_ PDB info PDB header:isomerase Chain: A: PDB Molecule:triosephosphate isomerase; PDBTitle: crystal structure of tt0473, putative triosephosphate isomerase from2 thermus thermophilus hb8 Resolution 1.60 Å

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		1	.	.	.	.	.	.	.	.	10	.	.		.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.								.	.	70	.	.
Predicted Secondary structure														.																																																								.	.	.	.	.	.	.
Query SS confidence														.																																																								.	.	.	.	.	.	.
Query Sequence		M	S	R	P	L	L	Q	L	A	L	D	H	.	S	S	L	E	A	A	Q	R	D	V	T	L	L	K	D	S	V	D	I	V	E	A	G	T	I	L	C	L	N	E	G	L	G	A	V	K	A	L	R	E	Q	C	P	D	K	I	I	V	A	D	W	K	V	A	D	.	.	.	.	.	.	.	A	G	E	T	L
Query Conservation														.																																																								.	.	.	.	.	.	.
Alig confidence														.																			.	.																																				.	.	.	.	.	.	.
Template Conservation																																	.	.
Template Sequence		M	R	R	V	L	V	A	G	N	W	K	M	H	K	T	P	S	E	A	R	V	W	F	A	E	L	K	R	L	L	P	.	.	P	L	Q	S	E	A	A	V	L	P	A	F	P	I	L	P	V	A	K	E	V	L	A	E	T	Q	V	G	Y	G	A	Q	D	V	S	A	H	K	E	G	A	Y	T	G	E	V	S
Template Known Secondary structure													S																				.	.			S	S								G	G	G									T	T	S	S						S				S	S	S	S	S	S		T	T
Template Predicted Secondary structure																																	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.			.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
		73	.	.	.	.	.	.	80	.	.	.	.	.	.		.	.	.							90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.																.	.	.	.	.	130
Predicted Secondary structure																.				.	.	.	.	.	.																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																.				.	.	.	.	.	.																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	Q	Q	A	F	G	A	G	A	N	W	M	T	I	.	I	C	A	.	.	.	.	.	.	A	P	L	A	T	V	E	K	G	H	A	M	A	Q	R	C	G	G	E	I	Q	I	E	L	F	G	N	W	T	L	D	D	A	R	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	W	H	R	I	G	V
Query Conservation																.				.	.	.	.	.	.																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																.				.	.	.	.	.	.																						.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																															.	.	.
Template Sequence		A	R	M	L	S	D	L	G	C	R	Y	A	I	V	G	H	S	E	R	R	R	Y	H	G	E	T	D	A	L	V	A	E	K	A	K	R	L	L	E	E	G	I	T	P	I	.	.	.	L	C	V	G	E	P	L	E	V	R	E	K	G	E	A	V	P	Y	T	L	R	Q	L	R	G	S	L	E	G	V	E	P
Template Known Secondary structure								T	T		S					S								S																	T	T					.	.	.												T	T														T	T	T
Template Predicted Secondary structure																																															.	.	.
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.				.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
		131	.						.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160												.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.		.	.	.	.	.	.	.	190	.	.	.
Predicted Secondary structure				.	.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.																							.
Query SS confidence				.	.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.																							.
Query Sequence		R	Q	.	.	.	.	.	A	I	Y	H	R	G	R	D	A	Q	A	S	G	Q	Q	W	G	E	A	D	L	A	R	M	K	A	L	S	.	.	.	.	.	.	.	.	.	.	.	D	I	G	L	E	L	S	I	T	G	G	I	T	P	A	D	L	P	L	F	K	D	.	I	R	V	K	A	F	I	A	G	R	A
Query Conservation				.	.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.																							.
Alig confidence				.	.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.																							.
Template Conservation
Template Sequence		P	G	P	E	A	L	V	I	A	Y	E	P	V	W	A	I	G	T	G	K	N	A	T	P	E	D	A	E	A	M	H	Q	A	I	R	K	A	L	S	E	R	Y	G	E	A	F	A	S	R	V	R	I	L	Y	G	G	S	V	N	P	K	N	F	A	D	L	L	S	M	P	N	V	D	G	G	L	V	G	G	A
Template Known Secondary structure		S	S	G	G	G								G	G	G	S	S	S	S																													T	T							S	S			T	T	T						T	S	T	T							S	G	G
Template Predicted Secondary structure
Template SS confidence
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
		194	.	.	.	.	.	200	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	G	A	A	N	P	A	Q	V	A	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	L	E	L	E	S	F	L	A	L	L	R
Template Known Secondary structure		G	S	S
Template Predicted Secondary structure
Template SS confidence
		236	.	.	.	240	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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