Return to main results Retrieve Phyre Job Id

Job DescriptionP37678
Confidence89.26%DateThu Jan 5 11:56:52 GMT 2012
Rank354Aligned Residues107
% Identity9%Templatec1ytkA_
PDB info PDB header:transferaseChain: A: PDB Molecule:nicotinate phosphoribosyltransferase from thermoplasma PDBTitle: crystal structure of a nicotinate phosphoribosyltransferase from2 thermoplasma acidophilum with nicotinate mononucleotide
Resolution2.65 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   93......100.........110........ .120......... 130.........140.........150.........160.......
Predicted Secondary structure 







...

..


















Query SS confidence 

























. . .










. .





































Query Sequence  ATVEKGHAMAQRCGGEIQIELFGNWT. . . LDDARDWHRIG. . VRQAIYHRGRDAQASGQQWGEADLARMKALSDIGLELS
Query Conservation    
          
    
 
     ...           ..   
           
          

        
 
Alig confidence 

























...










..





































Template Conservation 
    
               




      
           





     


  
    
  

  
   
 
 
Template Sequence  GDEEAWKLTLENTKNGQKSVLLIDTYMDEKFAAIKIAEMFDKVDYIRLDTPSSRRGNFEALIREVRWELALRGRSDIKIM
Template Known Secondary structure  T

TTS



SSS
TT
S





GGG
S
TT
TTS
Template Predicted Secondary structure 



























Template SS confidence 















































































   189190.........200.........210.........220.........230.........240.........250.........260........
 
   168.170.........180.........190.........
Predicted Secondary structure 













Query SS confidence 































Query Sequence  ITGGITPADLPLFKDIRVKAFIAGRALAGAAN
Query Conservation 
 


           


 






  
 
Alig confidence 































Template Conservation   




   
  
   


 




 
   
 
Template Sequence  VSGGLDENTVKKLREAGAEAFGVGTSISSAKP
Template Known Secondary structure  SS

T


T


Template Predicted Secondary structure 















Template SS confidence 































   269270.........280.........290.........300
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions