Job Description P37678 Confidence 96.76% Date Thu Jan 5 11:56:52 GMT 2012 Rank 237 Aligned Residues 170 % Identity 12% Template c1ydoC_ PDB info PDB header:lyase Chain: C: PDB Molecule:hmg-coa lyase; PDBTitle: crystal structure of the bacillis subtilis hmg-coa lyase, northeast2 structural genomics target sr181. Resolution 2.71 Å

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		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.		.	.	30	.	.	.	.	.	.				.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
Predicted Secondary structure																		.										.	.	.
Query SS confidence																		.										.	.	.
Query Sequence		H	S	S	L	E	A	A	Q	R	D	V	T	L	L	K	D	.	S	V	D	I	V	E	A	G	T	.	.	.	I	L	C	L	N	E	G	L	G	A	V	K	A	L	R	E	Q	C	P	D	K	I	I	V	A	D	W	K	V	A	D	A	G	E	T	L	A	Q	Q	A	F	G	A	G	A	N	W	M	T	I	I
Query Conservation																		.										.	.	.
Alig confidence																		.										.	.	.																																			.	.
Template Conservation																																																																	.	.
Template Sequence		W	I	A	T	E	D	K	I	T	W	I	N	Q	L	S	R	T	G	L	S	Y	I	E	I	T	S	F	V	H	P	K	W	I	P	A	L	R	D	A	I	D	V	A	K	G	I	D	R	E	K	G	V	T	Y	A	A	L	V	P	N	Q	R	G	.	.	L	E	N	A	L	E	G	G	I	N	E	A	C	V	F
Template Known Secondary structure																	T	T	T		S								S		T	T	T		G	G	G	T	T								S				T	T									S				.	.								T		S
Template Predicted Secondary structure																																																																	.	.
Template SS confidence
		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.			.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
		88	.	90	.	.	.																.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.													.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		C	A	A	P	L	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	V	E	K	G	H	A	M	A	Q	R	C	G	G	E	I	Q	I	E	L	F	G	N	W	T	.	.	.	.	.	.	.	.	.	.	.	.	L	D	D	A	R	D	W	H	R	I	G	V	R	Q	A	I	Y	H	R	G	R	D
Query Conservation								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.																					.	.
Template Conservation																																																																																.	.
Template Sequence		X	S	A	S	E	T	H	N	R	K	N	I	N	K	S	T	S	E	S	L	H	I	L	K	Q	V	N	N	D	A	Q	K	A	N	L	T	T	R	A	Y	L	S	T	V	F	G	C	P	Y	E	K	D	V	P	I	E	Q	V	I	R	L	S	E	A	L	F	E	F	G	I	S	E	L	S	L	G	D	T	.	.
Template Known Secondary structure				S	S						T	T	T		S																			T	T										T	T		B	T	T	T	B																		T		S							S	.	.
Template Predicted Secondary structure																																																																																.	.
Template SS confidence
		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
		141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.			.	.	.	.	.	.	.					.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.
Predicted Secondary structure																							.	.								.	.	.	.
Query SS confidence																							.	.								.	.	.	.
Query Sequence		A	Q	A	S	G	Q	Q	W	G	E	A	D	L	A	R	M	K	A	L	S	D	.	.	I	G	L	E	L	S	I	.	.	.	.	T	G	G	I	T	P	A	D	L	P	L	F	K	D	I	R	V	K	A	F
Query Conservation																							.	.								.	.	.	.
Alig confidence		.	.	.																			.	.								.	.	.	.
Template Conservation		.	.	.
Template Sequence		.	.	.	I	G	A	A	N	P	A	Q	V	E	T	V	L	E	A	L	L	A	R	F	P	A	N	Q	I	A	L	H	F	H	D	T	R	G	T	A	L	A	N	X	V	T	A	L	Q	X	G	I	T	V	F
Template Known Secondary structure		.	.	.	S																	T	T	S		G	G	G						B	G	G	G	S													T
Template Predicted Secondary structure		.	.	.
Template SS confidence
					180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions