Job Description P37678 Confidence 99.65% Date Thu Jan 5 11:56:52 GMT 2012 Rank 59 Aligned Residues 179 % Identity 13% Template c1yadD_ PDB info PDB header:transcription Chain: D: PDB Molecule:regulatory protein teni; PDBTitle: structure of teni from bacillus subtilis Resolution 2.10 Å

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		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.		.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
Predicted Secondary structure																															.																.
Query SS confidence																															.																.
Query Sequence		D	H	S	S	L	E	A	A	Q	R	D	V	T	L	L	K	D	S	V	D	I	V	E	A	G	T	I	L	C	.	L	N	E	G	L	G	A	V	K	A	L	R	E	Q	C	.	P	D	K	I	I	V	A	D	W	K	V	A	D	A	G	E	T	L	A	Q	Q	A	F	G	A	G	A	N	W	M	T	I	I	C
Query Conservation																															.																.
Alig confidence																															.																.									.	.	.	.	.	.	.	.
Template Conservation																																																								.	.	.	.	.	.	.	.
Template Sequence		D	S	K	P	V	E	E	L	A	R	I	I	I	T	I	Q	N	E	V	D	F	I	H	I	R	E	R	S	K	S	A	A	D	I	L	K	L	L	D	L	I	F	E	G	G	I	D	K	R	K	L	V	M	N	.	.	.	.	.	.	.	.	G	R	V	D	I	A	L	F	S	T	I	H	R	V	Q	L	P	S
Template Known Secondary structure		S		S													G	G	G		S							T	T	S															T	T			G	G	G					.	.	.	.	.	.	.	.	S							T	T	T								T
Template Predicted Secondary structure																																																								.	.	.	.	.	.	.	.
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.									.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.		.	.	.	.	.	.
Predicted Secondary structure																																																																											.
Query SS confidence																																																																											.
Query Sequence		A	A	P	L	A	T	V	E	K	G	H	A	M	A	Q	R	C	G	G	E	I	Q	I	E	L	F	G	N	W	T	L	D	D	A	R	D	W	H	R	I	G	V	R	Q	A	I	Y	H	R	G	R	D	A	Q	A	S	G	Q	Q	W	G	E	A	D	L	A	R	M	K	A	L	S	D	.	I	G	L	E	L	S
Query Conservation																																																																											.
Alig confidence				.	.	.	.																				.	.	.																									.	.	.	.	.	.	.	.	.	.	.											.
Template Conservation				.	.	.	.																				.	.	.																									.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	S	.	.	.	.	F	S	P	K	Q	I	R	A	R	F	P	H	L	H	I	G	R	S	V	.	.	.	H	S	L	E	E	A	V	Q	A	E	K	E	D	A	D	Y	V	L	F	G	H	V	F	R	.	.	.	.	.	.	.	.	.	.	.	G	V	S	L	L	S	D	I	K	Q	R	I	S	I	P	V	I
Template Known Secondary structure		T	S	.	.	.	.											T	T								.	.	.		S										T	T		S										.	.	.	.	.	.	.	.	.	.	.														S
Template Predicted Secondary structure				.	.	.	.																				.	.	.																									.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		81	.					.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.				.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.												.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	T	G	G	I	T	P	A	D	L	P	L	F	K	D	I	R	V	K	A	F	I	A	G	R	A	L	A	G	A	A	N	P	A	Q	V	A	G	D	F	H	A	Q	I	D	A	I	W
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	I	G	G	M	T	P	D	R	L	R	D	V	K	Q	A	G	A	D	G	I	A	V	M	S	G	I	F	S	S	A	E	P	L	E	A	A	R	R	Y	S	R	K	L	K	E	M	R
Template Known Secondary structure				S	S			G	G	G							T	T		S					S					T	S	S	S
Template Predicted Secondary structure
Template SS confidence
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions