Job Description P37678 Confidence 97.72% Date Thu Jan 5 11:56:52 GMT 2012 Rank 188 Aligned Residues 209 % Identity 15% Template c1telA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:ribulose bisphosphate carboxylase, large subunit; PDBTitle: crystal structure of a rubisco-like protein from chlorobium2 tepidum Resolution 2.70 Å

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		3	.	.	.	.	.	.	10	.	.				.	.	.	.	.	.	.	20	.	.	.	.	.	.	.		.	.	30	.	.	.	.	.	.	.	.	.											40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.
Predicted Secondary structure												.	.	.																.													.	.	.	.	.	.	.	.	.	.
Query SS confidence												.	.	.																.													.	.	.	.	.	.	.	.	.	.
Query Sequence		R	P	L	L	Q	L	A	L	D	H	.	.	.	S	S	L	E	A	A	Q	R	D	V	T	L	L	K	D	.	S	V	D	I	V	E	A	G	T	I	L	C	.	.	.	.	.	.	.	.	.	.	L	N	E	G	L	G	A	V	K	A	L	R	E	Q	C	P	D	K	I	I	V	A	D	W	K	V	A	D	A
Query Conservation												.	.	.																.													.	.	.	.	.	.	.	.	.	.
Alig confidence												.	.	.																.													.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	P	I	F	F	G	V	V	K	P	N	I	G	L	S	P	G	E	F	A	E	I	A	Y	Q	S	W	L	G	G	L	D	I	A	K	D	D	E	M	L	A	D	V	T	W	S	S	I	E	E	R	A	A	H	L	G	K	A	R	R	K	A	E	A	E	T	G	E	P	K	I	Y	L	A	N	I	T	D	E	V
Template Known Secondary structure		S								S	S		T	T																	T		S						T	T		S	S	B	T	T	B																					S	S												G
Template Predicted Secondary structure
Template SS confidence
		1164	.	.	.	.	.	1170	.	.	.	.	.	.	.	.	.	1180	.	.	.	.	.	.	.	.	.	1190	.	.	.	.	.	.	.	.	.	1200	.	.	.	.	.	.	.	.	.	1210	.	.	.	.	.	.	.	.	.	1220	.	.	.	.	.	.	.	.	.	1230	.	.	.	.	.	.	.	.	.	1240	.	.	.
		69	70	.	.			.	.	.	.	.	.	.	80	.	.	.	.	.	.	.		.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.									.	.	.	.	.			.	.	.	120	.	.	.	.	.	.	.	.		.	130	.	.	.	.
Predicted Secondary structure						.	.																.																									.	.	.	.	.	.	.	.						.	.													.
Query SS confidence						.	.																.																									.	.	.	.	.	.	.	.						.	.													.
Query Sequence		G	E	T	L	.	.	A	Q	Q	A	F	G	A	G	A	N	W	M	T	I	I	.	C	A	A	P	L	A	T	V	E	K	G	H	A	M	A	Q	R	C	G	G	E	I	Q	I	.	.	.	.	.	.	.	.	E	L	F	G	N	.	.	W	T	L	D	D	A	R	D	W	H	R	I	.	G	V	R	Q	A	I
Query Conservation						.	.																.																									.	.	.	.	.	.	.	.						.	.													.
Alig confidence						.	.																.												.	.	.											.	.	.	.	.	.	.	.						.	.													.
Template Conservation																																			.	.	.
Template Sequence		D	S	L	M	E	K	H	D	V	A	V	R	N	G	A	N	A	L	L	I	N	A	L	P	V	G	L	S	A	V	R	M	L	.	.	.	S	N	Y	T	Q	V	P	L	I	G	H	F	P	F	I	A	S	F	S	R	M	E	K	Y	G	I	H	S	K	V	M	T	K	L	Q	R	L	A	G	L	D	A	V	I
Template Known Secondary structure		G	G												T																				.	.	.		T	T		S	S							T	T	T						S	T	T	S															T		S
Template Predicted Secondary structure																																			.	.	.
Template SS confidence
		1244	.	.	.	.	.	1250	.	.	.	.	.	.	.	.	.	1260	.	.	.	.	.	.	.	.	.	1270	.	.	.	.	.	.				.	.	.	1280	.	.	.	.	.	.	.	.	.	1290	.	.	.	.	.	.	.	.	.	1300	.	.	.	.	.	.	.	.	.	1310	.	.	.	.	.	.	.	.	.	1320
		135	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.						.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.		.		.	.	.	.	.		190	.	.	.	.	.	.	.	.	.		200	.	.	.	.	.
Predicted Secondary structure																													.	.	.	.	.																							.		.						.											.
Query SS confidence																													.	.	.	.	.																							.		.						.											.
Query Sequence		Y	H	R	G	R	D	A	Q	A	S	G	Q	Q	W	G	E	A	D	L	A	R	M	K	A	L	S	D	.	.	.	.	.	I	G	L	E	L	S	I	T	G	G	I	T	P	A	D	L	P	L	F	K	D	I	.	R	.	V	K	A	F	I	.	A	G	R	A	L	A	G	A	A	N	.	P	A	Q	V	A	G
Query Conservation																													.	.	.	.	.																							.		.						.											.
Alig confidence				.	.	.																							.	.	.	.	.																							.		.						.											.
Template Conservation				.	.	.
Template Sequence		M	P	.	.	.	G	F	G	D	R	M	M	T	P	E	E	E	V	L	E	N	V	I	E	C	T	K	P	M	G	R	I	K	P	C	L	P	V	P	G	G	S	D	S	A	L	T	L	Q	T	V	Y	E	K	V	G	N	V	D	F	G	F	V	P	G	R	G	V	F	G	H	P	M	G	P	K	A	G	A	K
Template Known Secondary structure				.	.	.		S	S	S	S	S																S			T	T										S	S	B		T	T	T										S	S		S				B		S	S	S	S	S		T	T
Template Predicted Secondary structure				.	.	.
Template SS confidence
		1321	.				.	.	.	.	.	.	.	1330	.	.	.	.	.	.	.	.	.	1340	.	.	.	.	.	.	.	.	.	1350	.	.	.	.	.	.	.	.	.	1360	.	.	.	.	.	.	.	.	.	1370	.	.	.	.	.	.	.	.	.	1380	.	.	.	.	.	.	.	.	.	1390	.	.	.	.	.	.	.
		206	.	.	.	210	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	F	H	A	Q	I	D	A	I	W	G	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	I	R	Q	A	W	E	A	I	E	Q	G
Template Known Secondary structure												T	T
Template Predicted Secondary structure
Template SS confidence
		1398	.	1400	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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