|   |
74 | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
. | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | G | Q | A | L | Q | Q | A | K | A | G | I | E | A | V | Y | L | S | G | W | Q | V | A | A | D | A | N | L | A | A | S | M | Y | P | D | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
Q | S | L | Y | P | A | N | S | V | P | A | V | V | E | R | I | N | N | T | F | R | R | A | D | Q | I | Q | W | S | A | G | I | E | P | G |
Query Conservation |   |
  |   |   |
|   |   |
|   |   |
|
|
|   |
|
|
|
|
|
|   |   |   |
|
|
|   |   |   |   |   |   |
|   |
|
| . | . | . | . | . | . | . | . | . | . |   |
|
|   |
|   |   |   |
|   |   |   |
|   |   |
|   |   |
|   |   |   |   |
|
|   |
|   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
| . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . |
Template Conservation |   |
|
|   |
|
|   |
|
|   |   |   |
|   |
|
|   |
|   |   |   |
|   |   |   |   |
|   |
|   |
|
| . | . |   |
|   |
|
|
|
|
|
|
|   |   |   |
|
|
|   |   |   |   |
|   |   |   |   |   |   |
|   |   |   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . |
Template Sequence |   |
A | V | D | A | V | K | S | A | T | Y | P | H | H | F | L | S | T | T | K | S | G | S | T | A | I | F | A | T | K | G | N | . |
. |
Q | N | G | H | V | I | L | R | G | G | A | S | G | P | N | F | S | K | E | H | V | D | D | C | I | A | K | L | K | K | A | D | I | N | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  | T | S |
|
|  |  |  |  |  |
| T | T | S |
|  |  |  |  |  |
|
|
|
| . | . | S |
|  |  |  |  |  |
|
|
| T | T |
|
|
|
| S |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
| . | . | . | . | . | . | . | . | . | . | . | . | . |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
| . | . |
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
201 | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | |
|
. | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
  |
  |   |
144 | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | |
|
|
|
|
. | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | |
|
. | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | |
|
|
|
200 | . | . | . | . | . | |
|
|
|
|
|
|
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
| . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
| . | . |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
| . | . | . | . | . | . | . |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
Query Sequence |   |
D | P | R | Y | V | D | Y | F | L | P | I | V | A | D | A | E | A | G | F | G | G | . |
. |
. |
. |
. |
V | L | N | A | F | E | L | M | K | A | M | I | E | A | G | A | A | . |
. |
A | V | H | F | E | D | Q | L | A | S | V | K | K | C | G | H | M | G | . |
. |
. |
. |
G | K | V | L | V | P | . |
. |
. |
. |
. |
. |
. |
Query Conservation |   |
  |   |   |   |   |
|   |   |
|
|
|
|
|
|
|
|
|
|   |
|   | . | . | . | . | . |   |   |
|
|   |
|
|
|
|   |   |   |   |
|
|
|
| . | . |   |
|
|
|
|
|
|   |   |   |   |
|
|
|
|
|   |   | . | . | . | . |
|
|   |
|
|   | . | . | . | . | . | . | . |
Alig confidence |   |
. | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
| . | . | . | . | . | . | . |
Template Conservation |   |
. | . | . | . | . | . | . | . |   |   |
|
|
|
|
|
|
|
|
|
|   |
|   |   |   |   |
|   |   |
|   |   |   |
|   |   |
|   |   |   |
|   |   |
|   |
|
|
|
|
|
|   |
|   |   |
|   |
|   |   |   |   |   |   |
|   |
|
|   |
|
|
|
|   |
|
|   |
|   |   |
Template Sequence |   |
. |
. |
. |
. |
. |
. |
. |
. |
T | K | V | X | I | D | C | S | H | G | N | S | Q | K | D | H | S | K | Q | I | S | V | L | A | D | I | C | E | Q | I | K | H | S | N | D | I | F | G | V | X | I | E | S | N | L | V | A | G | N | Q | D | I | N | K | K | P | L | T | Y | G | Q | S | V | T | D | K | C | V | D | F | E | E |
Template Known Secondary structure |   |
. | . | . | . | . | . | . | . |
|
|  |  |  |  | S | S |  |  |  |  | T | T |
| G | G | G |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| S | S |  |  |  |  |  |  |  | B |
| S |  |  |  |  |
|
| T | T |
| S | S |
|
| T | T |  |  | S | S | S |
| B | B |
|  |  |  |
Template Predicted Secondary structure |   |
. | . | . | . | . | . | . | . |
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |
|
|
|
|
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
|
|
|
|
|
|
|
|
266 | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . |
  |
  |   |
206 | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
T | Q | E | A | I | Q | K | L | V | A | A | R | L | A | A |
Query Conservation |   |
  |   |
|   |
|   |
|
|   |
|
|   |   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |
|   |   |
|
|   |
|
|   |   |
|
Template Sequence |   |
T | V | K | X | L | E | X | L | A | E | A | V | Q | V | R |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
338 | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . |
  |