 |
Job Description | P0A9G6 | Confidence | 69.77% | Date | Thu Jan 5 11:10:09 GMT 2012 |
Rank | 124 | Aligned Residues | 69 |
% Identity | 14% | Template | c3sz8D_ |
PDB info |
PDB header:transferase | Chain: D: PDB Molecule:2-dehydro-3-deoxyphosphooctonate aldolase 2; |
PDBTitle: crystal structure of 2-dehydro-3-deoxyphosphooctonate aldolase from2 burkholderia pseudomallei
|
Resolution | 2.05 Å |
|
 |
  |   |
152 | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | P | I | V | A | D | A | E | A | G | F | G | G | V | L | N | A | F | E | L | M | K | A | M | I | E | A | G | A | A | A | V | H | F | E | D | Q | L | A | S | V | K | K | C | G | H | M | G | G | K | V | L | V | P | T | Q | E | A | I | Q | K | L | V | A | A | R | L | A | A | D | V | T | G | V | P |
Query Conservation |   |
|
|
|
|
|
|
|
|
|
|   |
|   |   |   |
|
|   |
|
|
|
|   |   |   |   |
|
|
|
|   |
|
|
|
|
|
|   |   |   |   |
|
|
|
|
|   |   |
|
|   |
|
|   |   |   |
|   |
|   |
|
|   |
|
|   |   |
|
|   |   |   |   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|   |   |
|   |
|
|   |   |
| . | . | . | . |   |   |   |   |   |   |
|
|
|
|   |
|
|   |
|   |   |
|
|
|
|   | . |   |
|
|   |
|   | . |   |
|
|   |   |   |   |
|   |   |   |
|   |   |   |
|
|   |
|   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
C | P | V | I | F | D | V | T | H | S | L | Q | . |
. |
. |
. |
V | L | D | L | A | R | A | G | I | A | V | G | I | A | G | L | F | L | E | A | H | P | . |
D | P | D | R | A | R | . |
P | S | A | L | P | L | H | Q | L | E | G | L | L | S | Q | M | K | A | I | D | D | L | V | K | R | M | P | A | L |
Template Known Secondary structure |   |
|
|  |  |  |  | T | T | T | T |
|
| . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |
|
| S |  |  |  |  |  |  |  | S | . |
| S | T | T |
|
| . |
|
|
|  |  | G | G | G |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|
|
|
Template Predicted Secondary structure |   |
|
|  |  |  |  |
|
|
|
|
|
| . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
| . |
|
|
|
|
|
| . |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
192 | . | . | . | . | . | . | . | 200 | . | . | . | |
|
|
|
. | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | |
. | . | . | . | 230 | . | |
. | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|