Job Description P0A9G6 Confidence 100.00% Date Thu Jan 5 11:10:09 GMT 2012 Rank 9 Aligned Residues 281 % Identity 26% Template c3fa4D_ PDB info PDB header:lyase Chain: D: PDB Molecule:2,3-dimethylmalate lyase; PDBTitle: crystal structure of 2,3-dimethylmalate lyase, a pep mutase/isocitrate2 lyase superfamily member, triclinic crystal form Resolution 2.18 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		45	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	Q	L	G	A	A	K	M	W	R	L	L	H	G	E	S	K	K	G	Y	I	N	S	L	G	A	L	T	G	G	Q	A	L	Q	Q	A	K	A	G	I	E	A	V	Y	L	S	G	W	Q	V	A	A	D	A	N	L	A	A	S	M	Y	P	D	Q	S	L	Y	P	A	N	S	V	P	A	V	V	E	R	I
Query Conservation
Alig confidence																	.	.																																										.	.	.	.
Template Conservation																	.	.																																										.	.	.	.
Template Sequence		P	M	V	T	A	A	T	S	L	R	R	A	L	E	N	.	.	P	D	S	F	I	V	A	P	G	V	Y	D	G	L	S	A	R	V	A	L	S	A	G	F	D	A	L	Y	M	T	G	A	G	T	A	A	S	V	H	G	Q	.	.	.	.	A	D	L	G	I	C	T	L	N	D	M	R	A	N	A	E	M	I
Template Known Secondary structure																S	.	.	T	T										S									T	T	T		S														T	S	S	.	.	.	.		S	S	S
Template Predicted Secondary structure																	.	.																																										.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.			.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.					.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
		125	.	.		.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.
Predicted Secondary structure					.
Query SS confidence					.
Query Sequence		N	N	T	.	F	R	R	A	D	Q	I	Q	W	S	A	G	I	E	P	G	D	P	R	Y	V	D	Y	F	L	P	I	V	A	D	A	E	A	G	F	G	G	V	L	N	A	F	E	L	M	K	A	M	I	E	A	G	A	A	A	V	H	F	E	D	Q	L	A	S	V	K	K	C	G	H	M	G	G	K	V	L
Query Conservation					.
Alig confidence					.			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																							.					.	.	.	.	.	.	.	.
Template Conservation								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																							.					.	.	.	.	.	.	.	.
Template Sequence		S	N	I	S	P	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	P	V	I	A	D	A	D	T	G	Y	G	G	P	I	M	V	A	R	T	T	E	Q	Y	S	R	S	G	V	A	A	F	H	I	E	D	Q	V	.	Q	T	K	I	.	.	.	.	.	.	.	.	L
Template Known Secondary structure					S	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S							T	T		S	S	S														T	T									B		.					.	.	.	.	.	.	.	.	B
Template Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																							.					.	.	.	.	.	.	.	.
Template SS confidence
		76	.	.	.	80	.																							.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.		120	.	.	.									.
		204	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.
Predicted Secondary structure																																																																																	.
Query SS confidence																																																																																	.
Query Sequence		V	P	T	Q	E	A	I	Q	K	L	V	A	A	R	L	A	A	D	V	T	G	V	P	T	L	L	V	A	R	T	D	A	D	A	A	D	L	I	T	S	D	C	D	P	Y	D	S	E	F	I	T	G	E	R	T	S	E	G	F	F	R	T	H	A	G	I	E	Q	A	I	S	R	G	L	A	Y	A	P	Y	.
Query Conservation																																																																																	.
Alig confidence																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.
Template Conservation																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	D	T	D	T	Y	V	T	R	I	R	A	A	V	Q	A	R	Q	R	I	G	S	D	I	V	V	I	A	R	T	D	S	L	Q	T	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	Y	E	E	S	V	A	R	L	R	A	A	R	D	A	G
Template Known Secondary structure																						T																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																T
Template Predicted Secondary structure																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		133	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.																													.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.
		283	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.		.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.
Predicted Secondary structure																										.
Query SS confidence																										.
Query Sequence		A	D	L	V	W	C	E	T	S	T	P	D	L	E	L	A	R	R	F	A	Q	A	I	H	.	A	K	Y	P	G	K	L	L	A	Y	N	C	S	P	S	F	N	W	Q	K	N	L	D	D	K	T	I	A	S	F	Q	Q	Q	L	S	D	M	G	Y	K	F	Q	F	I	T	L	A	G	I	H	S	M	W	F	N
Query Conservation																										.
Alig confidence												.														.																			.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation												.																																	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	D	V	G	F	L	E	G	I	T	.	S	R	E	M	A	R	Q	V	I	Q	D	L	A	G	W	P	L	L	L	N	M	V	E	H	G	A	T	P	S	I	S	A	.	.	.	.	.	.	.	.	.	.	.	.	.	A	E	A	K	E	M	G	F	R	I	I	I	F	P	F	A	A	L	G	P	A	V	A	A
Template Known Secondary structure			S					T	T			.												T	T	T	S		B						T	T	S	S	S						.	.	.	.	.	.	.	.	.	.	.	.	.							T		S					T	T	T	T
Template Predicted Secondary structure												.																																	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		185	.	.	.	.	190	.	.	.	.		.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.														.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250
		362	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	F	D	L	A	N	A	Y	A	Q	G	E	G	M	K	H	Y	V	E	K	V	Q	Q	P	E	F	A	A	A	K	D	G	Y	T	F	V	S	H	Q	Q	E	V	G	T	G	Y	F	D	K	V	T	T	I	I	Q	G
Query Conservation
Alig confidence												.																	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation												.																	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		M	R	E	A	M	E	K	L	K	R	.	D	G	I	P	G	L	D	K	E	M	T	P	Q	M	L	F	.	.	.	.	.	.	.	.	.	.	.	.	R	V	C	G	L	D	E	S	M	K	V	D	A	Q	A	G	G
Template Known Secondary structure												.		S	S					T	T		S						.	.	.	.	.	.	.	.	.	.	.	.			T	T
Template Predicted Secondary structure												.																	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		251	.	.	.	.	.	.	.	.	260		.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.													.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions