Job Description P0A9G6 Confidence 100.00% Date Thu Jan 5 11:10:09 GMT 2012 Rank 5 Aligned Residues 273 % Identity 32% Template c3eooL_ PDB info PDB header:lyase Chain: L: PDB Molecule:methylisocitrate lyase; PDBTitle: 2.9a crystal structure of methyl-isocitrate lyase from2 burkholderia pseudomallei Resolution 2.90 Å

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		49	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	A	A	K	M	W	R	L	L	H	G	E	S	K	K	G	Y	I	N	S	L	G	A	L	T	G	G	Q	A	L	Q	Q	A	K	A	G	I	E	A	V	Y	L	S	G	W	Q	V	A	A	D	A	N	L	A	A	S	M	Y	P	D	Q	S	L	Y	P	A	N	S	V	P	A	V	V	E	R	I	N	N	T	F
Query Conservation
Alig confidence															.	.	.																																							.	.	.	.
Template Conservation															.	.	.																																							.	.	.	.
Template Sequence		A	G	A	K	F	R	A	A	V	A	A	E	Q	.	.	.	P	L	Q	V	V	G	A	I	T	A	Y	A	A	K	M	A	E	A	V	G	F	K	A	V	Y	L	S	G	G	G	V	A	A	N	S	L	G	I	.	.	.	.	P	D	L	G	I	S	T	M	D	D	V	L	V	D	A	N	R	I	T	N	A	T
Template Known Secondary structure													S	S	.	.	.	S							S	S										T	T		S																S	.	.	.	.		S	S	S
Template Predicted Secondary structure															.	.	.																																							.	.	.	.
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.				.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.					60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		129	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	R	A	D	Q	I	Q	W	S	A	G	I	E	P	G	D	P	R	Y	V	D	Y	F	L	P	I	V	A	D	A	E	A	G	F	G	G	V	L	N	A	F	E	L	M	K	A	M	I	E	A	G	A	A	A	V	H	F	E	D	Q	L	A	S	V	K	K	C	G	H	M	G	G	K	V	L	V	P	T	Q	E
Query Conservation
Alig confidence			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																							.
Template Conservation			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																							.
Template Sequence		N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	P	L	L	V	D	I	D	T	G	W	G	G	A	F	N	I	A	R	T	I	R	S	F	I	K	A	G	V	G	A	V	H	L	E	D	Q	V	.	G	Q	K	R	C	G	H	R	P	G	K	E	C	V	P	A	G	E
Template Known Secondary structure			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S							T	T		S	S	S														T	T		S							B		.					T	T							B
Template Predicted Secondary structure			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																							.
Template SS confidence
		82																							.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120		.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.
		209	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.		.	.	.	.	.
Predicted Secondary structure																																																																												.
Query SS confidence																																																																												.
Query Sequence		A	I	Q	K	L	V	A	A	R	L	A	A	D	V	T	G	V	P	T	L	L	V	A	R	T	D	A	D	A	A	D	L	I	T	S	D	C	D	P	Y	D	S	E	F	I	T	G	E	R	T	S	E	G	F	F	R	T	H	A	G	I	E	Q	A	I	S	R	G	L	A	Y	A	P	Y	.	A	D	L	V	W
Query Conservation																																																																												.
Alig confidence														.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.
Template Conservation														.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		M	V	D	R	I	K	A	A	V	D	A	R	.	.	T	D	E	T	F	V	I	M	A	R	T	D	A	A	A	A	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	I	D	A	A	I	E	R	A	I	A	Y	V	E	A	G	A	D	M	I	F
Template Known Secondary structure														.	.	S		T	T	S													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																T		S
Template Predicted Secondary structure														.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		139	140	.	.	.	.	.	.	.	.	.	150			.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.																													.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.
		288	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	E	T	S	T	P	D	L	E	L	A	R	R	F	A	Q	A	I	H	A	K	Y	P	G	K	L	L	A	Y	N	C	S	P	S	F	N	W	Q	K	N	L	D	D	K	T	I	A	S	F	Q	Q	Q	L	S	D	M	G	Y	K	F	Q	F	I	T	L	A	G	I	H	S	M	W	F	N	M	F	D	L	A	N
Query Conservation
Alig confidence						.																																	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation						.																																	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	E	A	M	.	K	T	L	D	D	Y	R	R	F	K	E	A	V	K	V	P	I	L	A	N	L	T	E	F	G	S	T	P	L	F	T	L	.	.	.	.	.	.	.	.	.	.	.	.	.	D	E	L	K	G	A	N	V	D	I	A	L	Y	C	C	G	A	Y	R	A	M	N	K	A	A	L	N	F	Y	E
Template Known Secondary structure						.		S													S		B						T	T	S	S	S						.	.	.	.	.	.	.	.	.	.	.	.	.						T	T								S
Template Predicted Secondary structure						.																																	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		189	190	.	.		.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.														.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.
		368	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	Y	A	Q	G	E	G	M	K	H	Y	V	E	K	V	Q	Q	P	E	F	A	A	A	K	D	G	Y	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	V	R	R	D	G	T	Q	K	A	A	V	P	T	M	Q	T	R	A	Q	L	Y	D	Y	L	G	Y	Y
Template Known Secondary structure							S	S	S	G	G	G	G	G	G	S										T	T
Template Predicted Secondary structure
Template SS confidence
		255	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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