Job Description P0A9G6 Confidence 63.25% Date Thu Jan 5 11:10:09 GMT 2012 Rank 131 Aligned Residues 158 % Identity 14% Template c3bolB_ PDB info PDB header:transferase Chain: B: PDB Molecule:5-methyltetrahydrofolate s-homocysteine PDBTitle: cobalamin-dependent methionine synthase (1-566) from2 thermotoga maritima complexed with zn2+ Resolution 1.85 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	V	L	N	A	F	E	L	M	K	A	M	I	E	A	G	A	A	A	V	H	F	E	D	Q	L	A	S	V	K	K	C	G	H	M	G	G	K	V	L	V	P	T	Q	E	A	I	Q	K	L	V	A	A	R	L	A	A	D	V	T	G	V	P	T	L	L	V	A	R	T	D	A	D	A	A	D	L	I	T	S
Query Conservation
Alig confidence																					.	.																												.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																					.	.																												.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	P	D	V	V	L	K	V	H	R	S	Y	I	E	S	G	S	D	V	.	.	I	L	T	N	T	F	G	A	T	R	M	K	L	R	K	H	G	L	E	D	K	L	D	P	I	V	R	.	.	N	A	V	R	I	A	R	R	A	A	G	E	K	L	V	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure																	T		S		.	.				S		T	T		S					G	G	G	T		G	G	G							.	.											T	T	S				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																					.	.																												.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		42	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60			.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.			.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.
		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.					.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.		.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.
Predicted Secondary structure																	.	.	.	.																									.
Query SS confidence																	.	.	.	.																									.
Query Sequence		D	C	D	P	Y	D	S	E	F	I	T	G	E	R	T	.	.	.	.	S	E	G	F	F	R	T	H	A	G	I	E	Q	A	I	S	R	G	L	A	Y	A	P	Y	.	A	D	L	V	W	C	E	T	S	T	P	D	L	E	L	A	R	R	F	A	Q	A	I	H	A	K	Y	P	G	K	L	L	A	Y	N	C
Query Conservation																	.	.	.	.																									.
Alig confidence		.	.	.	.	.	.	.	.								.	.	.	.																									.									.
Template Conservation		.	.	.	.	.	.	.	.																																													.
Template Sequence		.	.	.	.	.	.	.	.	G	D	I	G	P	T	G	E	L	P	Y	P	L	G	S	T	L	F	E	E	F	Y	E	N	F	R	E	T	V	E	I	M	V	E	E	G	V	D	G	I	I	F	E	T	.	F	S	D	I	L	E	L	K	A	A	V	L	A	A	R	E	V	S	R	D	V	F	L	I	A	H	M
Template Known Secondary structure		.	.	.	.	.	.	.	.							S			B	T	T	T	S	S	B																				T		S							.																			S	S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.																																													.
Template SS confidence
										104	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.		.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
		319	320	.	.	.	.	.		.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Predicted Secondary structure									.
Query SS confidence									.
Query Sequence		S	P	S	F	N	W	Q	.	K	N	L	D	D	K	T	I	A	S	F	Q	Q	Q	L	S	D	M	G	Y	K	F	Q	F	I
Query Conservation									.
Alig confidence			.	.					.
Template Conservation			.	.
Template Sequence		T	.	.	F	D	E	K	G	R	S	L	T	G	T	D	P	A	N	F	A	I	T	F	D	E	L	D	I	D	A	L	G	I
Template Known Secondary structure			.	.			T	T	S			T	T	S												T	S	S		S
Template Predicted Secondary structure			.	.
Template SS confidence
		175			.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions