 |
Job Description | P0A9G6 | Confidence | 86.53% | Date | Thu Jan 5 11:10:09 GMT 2012 |
Rank | 91 | Aligned Residues | 109 |
% Identity | 22% | Template | c2r94B_ |
PDB info |
PDB header:lyase | Chain: B: PDB Molecule:2-keto-3-deoxy-(6-phospho-)gluconate aldolase; |
PDBTitle: crystal structure of kd(p)ga from t.tenax
|
Resolution | 2.20 Å |
|
 |
  |   |
164 | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|  |  |  |
|
|
|
|
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | V | L | N | A | F | E | L | M | K | A | M | I | E | A | G | A | A | A | V | H | F | E | D | Q | L | A | S | V | K | K | C | G | H | M | G | G | K | V | L | V | P | T | Q | E | A | I | Q | K | L | V | A | A | R | L | A | A | D | V | T | G | V | P | T | L | L | V | A | R | T | D | A | D | A | A | D | L | I | T | S |
Query Conservation |   |
  |   |   |
|
|   |
|
|
|
|   |   |   |   |
|
|
|
|   |
|
|
|
|
|
|   |   |   |   |
|
|
|
|
|   |   |
|
|   |
|
|   |   |   |
|   |
|   |
|
|   |
|
|   |   |
|
|   |   |   |   |   |
|   |   |
|
|
|
|
|
|
|   |   |
|   |   |
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
Template Conservation |   |
|   |   |   |   |   |   |   |
|   |   |
|   |   |   |
|
|   |
|
|   |
| . | . | . | . | . | . | . | . | . |   |
|
|
|
|
|   |   |   |
|
|   |
|
|
|   |   |
|   |   |   |   |   |   |   |   | . | . | . |   |   |
|
|   |
|
|   |   |   |   |   | . | . | . | . | . | . | . | . |
Template Sequence |   |
D | P | E | L | F | A | N | H | V | K | N | I | T | S | K | G | V | D | V | V | F | V | . |
. |
. |
. |
. |
. |
. |
. |
. |
A | G | T | T | G | L | G | P | A | L | S | L | Q | E | K | M | E | L | T | D | A | A | T | S | A | A | . |
. |
. |
R | R | V | I | V | Q | V | A | S | L | N | A | . |
. |
. |
. |
. |
. |
. |
. |
Template Known Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  | T | T | T |
|
|  |  |  |  | . | . | . | . | . | . | . | . | . | T | S | T | T | T | T | G | G | G | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| . | . | . | S |
|  |  |  |  |
|
|
| S | S |  | . | . | . | . | . | . | . | . |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
| . | . | . |
|
|  |  |  |  |  |
|
|
|
|  | . | . | . | . | . | . | . | . |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
37 | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
. | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | |
|
|
. | . | . | . | . | 90 | . | . | . | . | . | . | |
|
|
|
|
|
|
|
  |
  |   |
244 | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | |
. | . | . | . | . | . | . | 290 | . | |
|
|
|
. | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |
|
|  |  |  |  |
|
|
| . | . | . | . |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
D | C | D | P | Y | D | S | E | F | I | T | G | E | R | T | S | E | G | F | F | R | T | H | A | G | I | E | Q | A | I | S | R | G | L | A | Y | A | P | Y | . |
A | D | L | V | W | C | E | T | S | . |
. |
. |
. |
T | P | D | L | E | L | A | R | R | F | A | Q | A | I | H | A | K | Y | P | G | K | L | L | A | Y | N | C |
Query Conservation |   |
  |
|
|   |
|
|
|   |
|
|   |
|   |
|
|   |
|
|   |
|   |   |   |   |
|
|   |   |
|
|   |
|
|   |
|
|
|   |   | . |
|
|   |
|
|   |
|
|   | . | . | . | . |   |
|   |   |   |   |
|   |   |
|
|
|   |
|   |   |   |   |
|
|   |   |
|
|
|
|   |
Alig confidence |   |
. | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
. | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |
|
|   |   |
|   |   |
|   |   |   |
|
|
|   |
|   |   |   |   |
|   |
|   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |
|
|   |
|   |   |   |
|
|   |
|
|
|   |
Template Sequence |   |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
D | E | A | I | A | L | A | K | Y | A | E | S | R | G | A | E | A | V | A | S | L | P | P | Y | Y | F | P | R | L | S | E | R | Q | I | A | K | Y | F | R | D | L | C | S | A | V | S | I | P | V | F | L | Y | N | Y |
Template Known Secondary structure |   |
. | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
| S |  |  |  |  |
|
| S |
| S |
| S |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| S | S |
|  |  |  |  |  |
|
Template Predicted Secondary structure |   |
. | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
97 | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|