Job Description P0A9G6 Confidence 41.05% Date Thu Jan 5 11:10:09 GMT 2012 Rank 171 Aligned Residues 169 % Identity 15% Template c2ftpA_ PDB info PDB header:lyase Chain: A: PDB Molecule:hydroxymethylglutaryl-coa lyase; PDBTitle: crystal structure of hydroxymethylglutaryl-coa lyase from pseudomonas2 aeruginosa Resolution 2.40 Å

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		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	E	L	M	K	A	M	I	E	A	G	A	A	A	V	H	F	E	D	Q	L	A	S	V	K	K	C	G	H	M	G	G	K	V	L	V	P	T	Q	E	A	I	Q	K	L	V	A	A	R	L	A	A	D	V	T	G	V	P	T	L	L	V	A	R	T	D	A	D	A	A	D	L	I	T	S	D	C	D	P	Y
Query Conservation
Alig confidence																										.	.	.	.																																																		.	.	.
Template Conservation																										.	.	.	.																																																		.	.	.
Template Sequence		L	K	G	F	E	A	A	L	E	S	G	V	K	E	V	A	V	F	A	A	A	S	E	A	.	.	.	.	F	S	Q	R	N	I	N	C	S	I	K	D	S	L	E	R	F	V	P	V	L	E	A	A	R	Q	H	Q	V	R	V	R	G	Y	I	S	C	V	L	G	C	P	Y	D	G	D	V	D	P	.	.	.
Template Known Secondary structure											T	T										S				.	.	.	.							S	S																			T	T										T	T		B	T	T	T	B					.	.	.
Template Predicted Secondary structure																										.	.	.	.																																																		.	.	.
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.					.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
		249	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.		.	.	.	.	.	.	.	290	.	.	.			.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.
Predicted Secondary structure																																				.												.	.
Query SS confidence																																				.												.	.
Query Sequence		D	S	E	F	I	T	G	E	R	T	S	E	G	F	F	R	T	H	A	G	I	E	Q	A	I	S	R	G	L	A	Y	A	P	Y	.	A	D	L	V	W	C	E	T	S	T	P	.	.	D	L	E	L	A	R	R	F	A	Q	A	I	H	A	K	Y	P	G	K	L	L	A	Y	N	C	S	P	S	F	N	W	Q
Query Conservation																																				.												.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.												.	.																											.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																						.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	Q	V	A	W	V	A	R	E	L	Q	Q	M	G	C	Y	E	V	S	L	G	D	T	I	G	V	G	T	A	G	A	T	R	R	L	I	E	A	V	A	S	E	V	P	R	E	R	L	A	G	H	F	H	.	.	.	.	D	T
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													T	T		S							S	S	S															T	T	T	S		G	G	G						B	.	.	.	.		T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																						.	.	.	.
Template SS confidence
																							157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.					210	.
		326	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.									.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.
Predicted Secondary structure																																	.	.	.	.	.	.	.	.
Query SS confidence																																	.	.	.	.	.	.	.	.
Query Sequence		K	N	L	D	D	K	T	I	A	S	F	Q	Q	Q	L	S	D	M	G	Y	K	F	Q	F	I	T	L	A	G	I	H	.	.	.	.	.	.	.	.	S	M	W	F	N	M	F	D	L	A	N	A	Y	A	Q	G	E	G
Query Conservation																																	.	.	.	.	.	.	.	.
Alig confidence															.	.	.	.															.	.	.	.	.	.	.	.																.
Template Conservation															.	.	.	.																																						.
Template Sequence		Y	G	Q	A	L	A	N	I	Y	A	S	L	L	.	.	.	.	E	G	I	A	V	F	D	S	S	V	A	G	L	G	G	C	P	Y	A	K	G	A	T	G	N	V	A	S	E	D	V	L	Y	L	L	N	G	.	L	E
Template Known Secondary structure		T	S												.	.	.	.	T	T							B	G	G	G			B		G	G	G	T	T		B		B		B											.	T	T
Template Predicted Secondary structure															.	.	.	.																																						.
Template SS confidence
		212	.	.	.	.	.	.	.	220	.	.	.	.					.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.		.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions