 |
Job Description | P0A988 | Confidence | 3.47% | Date | Thu Jan 5 11:09:37 GMT 2012 |
Rank | 83 | Aligned Residues | 105 |
% Identity | 14% | Template | d2p2ea1 |
SCOP info | HesB-like domain
| HesB-like domain
| HesB-like domain
|
Resolution | 2.48 |
|
 |
  |   |
192 | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | |
|
|
|
|
. | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | |
|
240 | . | |
. | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
| . | . | . | . | . |
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |
|
| . | . |
|
| . |
|
|  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
S | V | I | V | P | R | K | G | V | I | E | L | M | R | M | L | D | G | G | D | N | P | L | R | V | Q | I | G | S | . |
. |
. |
. |
. |
N | N | I | R | A | H | V | G | D | F | I | F | T | S | K | L | V | D | G | . |
. |
R | F | . |
P | D | Y | R | R | V | L | P | K | N | P | D | K | H | L | E | A | G | C | D | L | L |
Query Conservation |   |
  |   |
|
|
|   |
|   |
|   |
|
|   |
|   |
|   |   |   |   |   |   |
|   |
|   |   |   |   | . | . | . | . | . |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |
| . | . |   |
| . |
|
|
|   |   |
|
|
|   |   |   |   |   |   |   |   |
|   |
|   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
| . |
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|
|   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |
|   |
|   |   |
|
|
|   |
|   |
|
|   |   |   |   |
|   |
|   |   |   |
|   |
|   |
|
|   |   |   |   |   |   |   |   |   |
|
|   |   |
|   |
|
|   |
| . |   |
|
|   |   |   |   |   |   |
Template Sequence |   |
K | I | T | V | T | D | D | A | A | K | K | L | Q | R | Y | T | D | D | S | N | A | V | L | L | L | D | F | D | D | G | V | G | A | L | S | K | V | G | V | C | S | L | N | S | D | F | R | I | L | V | V | S | K | D | X | D | Y | K | K | D | Y | N | E | V | I | D | S | N | I | G | . |
K | F | Y | Y | K | G | Y | S | K |
Template Known Secondary structure |   |
 |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  | T |
| T | T |  |  |  |  |  |  |  |
| S | S |
| S | G | G | G | G | S | S |
|
|
|
| S |
|
|  |  |  |  |  |  |  | T | T | S | S |
| T | T | T | S |
|  |  |  |  |  | T | T | S | . |
|  |  |  |
| G | G | G | G |
Template Predicted Secondary structure |   |
 |  |  |  |
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |
|
|
|
|
| . |  |  |  |  |
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
4 | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | |
. | . | . | . | . | . | 80 | . | . |
  |
  |   |
264 | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
K | Q | A | F | A | R | A | A | I | L | S | N | E | K | F | R | G | V | R | L | Y | V | S | E | N | Q | L | K | I | T | A | N | N | P | E | Q | E | E | A | E | E | I | L |
Query Conservation |   |
  |   |
|
|   |
|
|   |   |   |   |   |   |   |   |   |   |
|   |
|   |   |   |   |   |   |
|   |
|   |   |   |   |   |   |   |
|   |   |   |
|   |
|
Alig confidence |   |
|
|
| . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
| . | . | . | . | . | . | . | . | . |
|   |   |   |   |
|
|   |   |   |   |   |   |   |
|   |
|
|
|
|   |
|
|
|
|   |   |   |
|   |
|
Template Sequence |   |
X | Y | X | . |
. |
. |
. |
. |
. |
. |
. |
. |
D | D | N | X | K | I | S | L | N | T | N | N | S | L | L | R | L | T | G | D | N | S | G | E | L | X | P | A | L | S | I |
Template Known Secondary structure |   |
G | G | S | . | . | . | . | . | . | . | . | . |
| S |  |  |  |  |  |  |
| S | S | S | S |
|  |  |  |  |  | T | T | T |  |  |  |  |  |  |  |
|  |
Template Predicted Secondary structure |   |
|
|
| . | . | . | . | . | . | . | . | . |
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|  |  |
|
|
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
83 | . | . | |
|
|
|
|
|
|
|
|
. | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|