Job Description P0A988 Confidence 99.97% Date Thu Jan 5 11:09:37 GMT 2012 Rank 15 Aligned Residues 121 % Identity 26% Template d1vpka2 SCOP info DNA clamp DNA clamp DNA polymerase III, beta subunit Resolution 2.00

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		123	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	S	E	V	E	F	T	L	P	Q	A	T	M	K	R	L	I	E	A	T	Q	F	S	M	A	H	Q	D	V	R	Y	Y	L	N	G	M	L	F	E	T	E	G	E	E	L	R	T	V	A	T	D	G	H	R	L	A	V	C	S	M	P	I	G	Q	S	L	P	S	H	S	V	I	V	P	R	K	G	V	I	E
Query Conservation
Alig confidence																																																																			.
Template Conservation																																																																			.
Template Sequence		E	S	G	I	T	F	E	V	D	T	S	L	L	E	E	M	V	E	K	V	I	F	A	A	A	K	D	E	F	M	R	N	L	N	G	V	F	W	E	L	H	K	N	L	L	R	L	V	A	S	D	G	F	R	L	A	L	A	E	E	Q	I	E	N	E	.	E	E	A	S	F	L	L	S	L	K	S	M	K	E
Template Known Secondary structure			S	S																		G	G	G	S				T	T		T	T	T	S								T	T									S	S													.	S
Template Predicted Secondary structure																																																																			.
Template SS confidence
		122	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.		.	.	.	190	.	.	.	.	.	.	.	.	.	200
		203	.	.	.	.	.	.	210	.		.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
Predicted Secondary structure											.
Query SS confidence											.
Query Sequence		L	M	R	M	L	D	G	G	D	.	N	P	L	R	V	Q	I	G	S	N	N	I	R	A	H	V	G	D	F	I	F	T	S	K	L	V	D	G	R	F	P	D	Y
Query Conservation											.
Alig confidence											.
Template Conservation
Template Sequence		V	Q	N	V	L	D	N	T	T	E	P	T	I	T	V	R	Y	D	G	R	R	V	S	L	S	T	N	D	V	E	T	V	M	R	V	V	D	A	E	F	P	D	Y
Template Known Secondary structure								T				S								S	S							S	S									S	S
Template Predicted Secondary structure
Template SS confidence
		201	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions